RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR8G3PP0DMU2 310 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 GABRB1P18505 474 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 TACR3P29371 465 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 RFX2P48378 723 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 PER3P56645 1201 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 OPN5Q6U736 354 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ACOT7LQ6ZUV0 252 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR13C2Q8NGS9 318 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 POFUT1Q9H488 388 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF768Q9H5H4 540 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ACTL7AQ9Y615 435 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 GJE1A6NN92 205 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SYT5O00445 386 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CCR7P32248 378 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMEM106AQ96A25 262 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SPHK1Q9NYA1 384 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZP3P21754 424 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 FPR3P25089 353 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 RNF151Q2KHN1 245 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 CDH26Q8IXH8 852 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SEMA6DQ8NFY4 1073 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 RSPRY1Q96DX4 576 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SCLYQ96I15 445 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLC41A2Q96JW4 573 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 F5H5K5 113 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF888P0CJ79 500 aaPredicted RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ARSAP15289 507 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SERPINA2P20848 420 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 PHF19Q5T6S3 580 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 MED20Q9H944 212 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 GAB2Q9UQC2 676 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 TACR1P25103 407 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 CCL14Q16627 93 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 IAH1Q2TAA2 248 aaPredicted RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 PDLIM3Q53GG5 364 aaPredicted RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM164Q5U3C3 297 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR7E24Q6IFN5 339 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 KCNG3Q8TAE7 436 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 KATNB1Q9BVA0 655 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM59Q9BXS4 323 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 IGLON5A6NGN9 336 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPX5O75715 221 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 CALCBP10092 127 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SRMP19623 302 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLCO4A1Q96BD0 722 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 RNF212BA8MTL3 300 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ACTL6BO94805 426 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 F3P13726 295 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 KITLGP21583 273 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 CLPPQ16740 277 aaPredicted RBP11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 CLLU1Q5K131 121 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 L3MBTL4Q8NA19 623 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR14L1PQ8NHC6 308 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 ARRDC2Q8TBH0 407 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 HPSE2Q8WWQ2 592 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRSS21Q9Y6M0 314 aa11.83□□□□□ -0.52
SYNCRIP-201ENST00000355238 NPIPA5A0A0B4J1W7 369 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 NPIPA7E9PJI5 369 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SCO1O75880 301 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 NPIPA8P0DM63 369 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF239Q16600 458 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 GLYR1Q49A26 553 aaPredicted RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 TEX261Q6UWH6 196 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 APH1BQ8WW43 257 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ALG12Q9BV10 488 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 PAPOLGQ9BWT3 736 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 B4GALT7Q9UBV7 327 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 U3KQ87 197 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 NSA2O95478 260 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR6M1Q8NGM8 313 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SIDT1Q9NXL6 827 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ANKRD12Q6UB98 2062 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 RNGTTO60942 597 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 CSF3P09919 207 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 BCKDHBP21953 392 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 ALKBH1Q13686 389 aaKnown RBP11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 SCD5Q86SK9 330 aa11.82□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR5M8Q8NGP6 311 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms