RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IDSB3KWA1 339 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 OGG1O15527 345 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 ALOX12BO75342 701 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SDHAP31040 664 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 PYCR1P32322 319 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 CAV3P56539 151 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 E2F1Q01094 437 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 INSL4Q14641 139 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 CDONQ4KMG0 1287 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 LEG1Q6P5S2 330 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SSX6Q7RTT6 188 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 OVCH1Q7RTY7 1134 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 NANOGNBQ7Z5D8 188 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 MISPQ8IVT2 679 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 CADM3Q8N126 398 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SLC38A9Q8NBW4 561 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SMAP2Q8WU79 429 aaPredicted RBP15.19■□□□□ 0.02
SAMM50-201ENST00000350028 METTL21AQ8WXB1 218 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 ACOT12Q8WYK0 555 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 HTRA1Q92743 480 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 KTI12Q96EK9 354 aaPredicted RBP15.19■□□□□ 0.02
SAMM50-201ENST00000350028 CCDC74BQ96LY2 380 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 DEPDC7Q96QD5 511 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 LPAR4Q99677 370 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 KLHDC3Q9BQ90 382 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 GAREM1Q9H706 876 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 ST6GALNAC2Q9UJ37 374 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 DMDP11532 3685 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 TRAV36DV7A0A075B6V5 113 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 LAMTOR5O43504 91 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 BGLAPP02818 100 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 CD1AP06126 327 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 EVI2BP34910 448 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
SAMM50-201ENST00000350028 SLC3A1Q07837 685 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 CLPPQ16740 277 aaPredicted RBP15.18■□□□□ 0.02
SAMM50-201ENST00000350028 GPR139Q6DWJ6 353 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 PWWP2BQ6NUJ5 590 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 PAMR1Q6UXH9 720 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 GDPD3Q7L5L3 318 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 TPRA1Q86W33 373 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 EID2Q8N6I1 236 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 TEX19Q8NA77 164 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 OR51L1Q8NGJ5 315 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 OR5J2Q8NH18 312 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 TAAR8Q969N4 342 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 RNF32Q9H0A6 362 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 FSCN3Q9NQT6 498 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 C14orf119Q9NWQ9 140 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 COMMD3Q9UBI1 195 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 ADAM30Q9UKF2 790 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 PPIEQ9UNP9 301 aaKnown RBP15.18■□□□□ 0.02
SAMM50-201ENST00000350028 NPFFR2Q9Y5X5 522 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 ZDBF2Q9HCK1 2354 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 CABIN1Q9Y6J0 2220 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 CACNA1EQ15878 2313 aa15.18■□□□□ 0.02
SAMM50-201ENST00000350028 IGHV3-20A0A0C4DH32 117 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 KHNYNO15037 678 aaKnown RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SLC25A12O75746 678 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 TIAF1O95411 115 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 NUDT14O95848 222 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SERPINA3P01011 423 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 PTBP1P26599 531 aaKnown RBP eCLIP15.17■□□□□ 0.025e-8■■■□□ 17.4
SAMM50-201ENST00000350028 NAA10P41227 235 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 POLR2HP52434 150 aaKnown RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 HCCSP53701 268 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 EMP2P54851 167 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 RPL18Q07020 188 aaKnown RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 TOMM34Q15785 309 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 TP53I3Q53FA7 332 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 PEAR1Q5VY43 1037 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 LSM14AQ8ND56 463 aaKnown RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 NUBPLQ8TB37 319 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SNX33Q8WV41 574 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 ZNRF4Q8WWF5 429 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 PGLYRP3Q96LB9 341 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 NCDNQ9UBB6 729 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 PCDHGB2Q9Y5G2 931 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 VSTM2BA6NLU5 285 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 BOLA2-SMG1P6H3BVE0 249 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SCO2O43819 266 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 TMCC2O75069 709 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SC5DO75845 299 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 MT-ATP6P00846 226 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 CFIP05156 583 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 IL7P13232 177 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 MYL9P24844 172 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 CD97P48960 835 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SLC26A5P58743 744 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 ZMAT1Q5H9K5 638 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 LINC01590Q5TEZ4 76 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 ZNF385CQ66K41 422 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 RPL22L1Q6P5R6 122 aaKnown RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 CEACAM19Q7Z692 300 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 BPHLQ86WA6 291 aaPredicted RBP15.17■□□□□ 0.02
SAMM50-201ENST00000350028 APCDD1LQ8NCL9 501 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 ZPLD1Q8TCW7 415 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 GPR119Q8TDV5 335 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms