RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 NOSIPQ9Y314 301 aaKnown RBP13.61□□□□□ -0.23
VAPA-201ENST00000340541 NME4O00746 187 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 ADAP00813 363 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 PPP3CBP16298 524 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 COX5AP20674 150 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 LOXP28300 417 aaPredicted RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 PRDX6P30041 224 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 SLC7A2P52569 658 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 NCALDP61601 193 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 P2RY6Q15077 328 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 POU4F3Q15319 338 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 ZNF613Q6PF04 617 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 LINC00114Q6XXX2 140 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 P3H2Q8IVL5 708 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 MICU2Q8IYU8 434 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 VANGL1Q8TAA9 524 aaPredicted RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 HOPXQ9BPY8 73 aaPredicted RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 TAPBPLQ9BX59 468 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 GSX1Q9H4S2 264 aaPredicted RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 FANCFQ9NPI8 374 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 ZNF226Q9NYT6 803 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
VAPA-201ENST00000340541 SEC14L4Q9UDX3 406 aa13.6□□□□□ -0.23
VAPA-201ENST00000340541 ELOVL7A1L3X0 281 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 FAM171A2A8MVW0 826 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ARHGEF9O43307 516 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 IGHV3-9P01782 118 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 IGHV1-2P23083 117 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 KDELR2P33947 212 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 NUDT2P50583 147 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 LIPEQ05469 1076 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ITGADQ13349 1161 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ENTPD8Q5MY95 495 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 C5orf46Q6UWT4 87 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ZNF100Q8IYN0 542 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 STEAP2Q8NFT2 490 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 SLC26A7Q8TE54 656 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 RASSF5Q8WWW0 418 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 TMEM45BQ96B21 275 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 APH1AQ96BI3 265 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 CMTM5Q96DZ9 223 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ZNF385AQ96PM9 386 aaKnown RBP13.59□□□□□ -0.23
VAPA-201ENST00000340541 HDHD5Q9BXW7 423 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 FAM53CQ9NYF3 392 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 SLC9A8Q9Y2E8 581 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 AP3M1Q9Y2T2 418 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
VAPA-201ENST00000340541 TRAV36DV7A0A075B6V5 113 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
VAPA-201ENST00000340541 KLF4O43474 513 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 CHP2O43745 196 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 MRPL33O75394 65 aaKnown RBP13.58□□□□□ -0.24
VAPA-201ENST00000340541 TNFRSF1BP20333 461 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
VAPA-201ENST00000340541 LTBQ06643 244 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 CYBRD1Q53TN4 286 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 FAM69AQ5T7M9 428 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 SEZ6L2Q6UXD5 910 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 EPHX4Q8IUS5 362 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 OR6S1Q8NH40 331 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 ADAMTS16Q8TE57 1224 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 PIGTQ969N2 578 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 SLC25A36Q96CQ1 311 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 ABCD2Q9UBJ2 740 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 MALT1Q9UDY8 824 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 ARL2BPQ9Y2Y0 163 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 SH3GLB1Q9Y371 365 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 ROS1P08922 2347 aa13.58□□□□□ -0.24
VAPA-201ENST00000340541 M0R082 166 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 PDLIM1O00151 329 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 OR2T1O43869 369 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 LYZL6O75951 148 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 VAMP5O95183 116 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 BGLAPP02818 100 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 INHBBP09529 407 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 PTNP21246 168 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 GRPRP30550 384 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 GSK3BP49841 420 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 FOXG1P55316 489 aaPredicted RBP13.57□□□□□ -0.24
VAPA-201ENST00000340541 PSME3P61289 254 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 TAB1Q15750 504 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms