RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GCNT2Q8N0V5 402 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NLGN4XQ8N0W4 816 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 KCNA7Q96RP8 456 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 DDOQ99489 341 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NXF5Q9H1B4 397 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 KIAA2026Q5HYC2 2103 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TECPR2O15040 1411 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 AK1P00568 194 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CSTAP01040 98 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 MTHFD2P13995 350 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 BDKRB1P46663 353 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 UBE2NP61088 152 aaKnown RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 FABP9Q0Z7S8 132 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 FUT2Q10981 343 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 COL5A1-AS1Q5SY13 56 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 MAMDC4Q6UXC1 1216 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TRMT2BQ96GJ1 504 aaKnown RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 DMAC2Q9NW81 257 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 HAS3O00219 553 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 GDNFP39905 211 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CLCNKAP51800 687 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CEBPEQ15744 281 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF440Q8IYI8 595 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 NECAP1Q8NC96 275 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 ISL2Q96A47 359 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 PDE7BQ9NP56 450 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF355PQ9NSJ1 428 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 K7ERQ8 282 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 OR2J3O76001 311 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 F7P08709 466 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 OR4D2P58180 307 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR137CQ8N3F9 429 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 GPX8Q8TED1 209 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 OR2M5A3KFT3 312 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CLDN6P56747 220 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 GDPD3Q7L5L3 318 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TM7SF3Q9NS93 570 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 RCE1Q9Y256 329 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 SGK494L7N484 410 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC35E2BP0CK96 405 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 C21orf33P30042 268 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 EXOSC6Q5RKV6 272 aaKnown RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 DHRS11Q6UWP2 260 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 DYNC2LI1Q8TCX1 351 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 PARD6AQ9NPB6 346 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 NDUFB11Q9NX14 153 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TTC24A2A3L6 582 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 POM121BA6NF01 834 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TMEM210A6NLX4 147 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 F6UZH7 168 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 NXPH3O95157 252 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 FHITP49789 147 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC22A6Q4U2R8 563 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 RTP4Q96DX8 246 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 HRASLSQ9HDD0 168 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 RNF11Q9Y3C5 154 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 UGDHO60701 494 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 B2MP61769 119 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 B3GNTL1Q67FW5 361 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CGB2Q6NT52 195 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 CXCL17Q6UXB2 119 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR119Q8TDV5 335 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TBC1D20Q96BZ9 403 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 NICN1Q9BSH3 213 aa9.68□□□□□ -0.86
SPTBN1-201ENST00000333896 TBPP20226 339 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 RAB11AP62491 216 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 SQSTM1Q13501 440 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 PLBD1Q6P4A8 553 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 OR13C9Q8NGT0 318 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 OR14L1PQ8NHC6 308 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 ARNTLO00327 626 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 DLX2Q07687 328 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 SFXN4Q6P4A7 337 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 SIAH3Q8IW03 269 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 ARHGDIGQ99819 225 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 SERTAD3Q9UJW9 196 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 CRYM-AS1A6NIL9 109 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 MPIG6BO95866 241 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 ATP1B2P14415 290 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 DHPSP49366 369 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 TAZQ16635 292 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 PRR27Q6MZM9 219 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 LETMD1Q6P1Q0 360 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 WDR88Q6ZMY6 472 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 GNPNAT1Q96EK6 184 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 TSSK2Q96PF2 358 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 PDCD2LQ9BRP1 358 aa9.67□□□□□ -0.86
SPTBN1-201ENST00000333896 NAA50Q9GZZ1 169 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms