RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ZAR1LA6NP61 321 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 SLC16A6O15403 523 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 AHCYP23526 432 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 ELK4P28324 431 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 GIPRP48546 466 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 ESRRGP62508 458 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 RPS4XP62701 263 aaKnown RBP13.71□□□□□ -0.21
PRPF3-201ENST00000324862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.212e-7■■■□□ 15.3
PRPF3-201ENST00000324862 USP51Q70EK9 711 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 BCDIN3DQ7Z5W3 292 aaKnown RBP13.71□□□□□ -0.21
PRPF3-201ENST00000324862 TMEM99Q8N816 258 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 UCN2Q96RP3 112 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 GPR52Q9Y2T5 361 aa13.71□□□□□ -0.21
PRPF3-201ENST00000324862 MRPS18CQ9Y3D5 142 aaKnown RBP13.71□□□□□ -0.21
PRPF3-201ENST00000324862 IMPA2O14732 288 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 PPP1R3DO95685 299 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.22
PRPF3-201ENST00000324862 LHX2P50458 406 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 OR2B6P58173 313 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 WLSQ5T9L3 541 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 TMPPEQ6ZT21 453 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 GHDCQ8N2G8 530 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.22
PRPF3-201ENST00000324862 FAM81AQ8TBF8 368 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 KLHL15Q96M94 604 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 IFT27Q9BW83 186 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 EXO5Q9H790 373 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 FKRPQ9H9S5 495 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.22
PRPF3-201ENST00000324862 SULT2B1O00204 365 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 ADORA3P0DMS8 318 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 ENPP1P22413 925 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 EIF1AXP47813 144 aaKnown RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 HSPA13P48723 471 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 CNIH3Q8TBE1 160 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 LIPHQ8WWY8 451 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 IL4I1Q96RQ9 567 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 TVP23BQ9NYZ1 205 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 HIF3AQ9Y2N7 669 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 SPTA1P02549 2419 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 SVILO95425 2214 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 TRGV5A0A0B4J1U4 118 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 EIF4E1BA6NMX2 242 aaKnown RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 H0YAE9 185 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 HCN1O60741 890 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 UQCRC1P31930 480 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 CLDN18P56856 261 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 ERVK-25P63136 954 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 CDK5Q00535 292 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 LY6DQ14210 128 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 MAMDC2Q7Z304 686 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 OR5J2Q8NH18 312 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 MFSD8Q8NHS3 518 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-201ENST00000324862 MIB2Q96AX9 1013 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 CNTNAP3BQ96NU0 1288 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 TAPBPLQ9BX59 468 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 CNTNAP3Q9BZ76 1288 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 ACKR4Q9NPB9 350 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
PRPF3-201ENST00000324862 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 BHLHE40O14503 412 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 DENRO43583 198 aaKnown RBP13.69□□□□□ -0.22
PRPF3-201ENST00000324862 OR2T1O43869 369 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 CXCL13O43927 109 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 GGT2P36268 569 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 NUP107P57740 925 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 IL5RAQ01344 420 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 TOP3AQ13472 1001 aaPredicted RBP13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ALG10Q5BKT4 473 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF691Q5VV52 312 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 SLC27A4Q6P1M0 643 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 SIAH3Q8IW03 269 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ENTHD1Q8IYW4 607 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 OR10D3Q8NH80 312 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 NEIL3Q8TAT5 605 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ADGRG7Q96K78 797 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 PITX2Q99697 317 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 MS4A18H0YCH9 400 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 PLPP3O14495 311 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 PRKYO43930 277 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 NDUFB2O95178 105 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 MT-ATP6P00846 226 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 IGF2P01344 180 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 HIST1H2ABP04908 130 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 P2RY4P51582 365 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms