RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 SERTAD2Q14140 314 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 FXNQ16595 210 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 PRSS42Q7Z5A4 293 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 SLC22A23A1A5C7 686 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 RDH16O75452 317 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 C14orf28Q4W4Y0 310 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 TMEM201Q5SNT2 666 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 DPY19L2P2Q6ZN68 376 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 SLC25A32Q9H2D1 315 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 METTL7AQ9H8H3 244 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 FER1L6Q2WGJ9 1857 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 MAKP20794 623 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 GNRHRP30968 328 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 VIPR2P41587 438 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 NLRC3Q7RTR2 1065 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 SMARCD2Q92925 531 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 ARL5BQ96KC2 179 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 UQCC2Q9BRT2 126 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 SLC6A20Q9NP91 592 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 FZD3Q9NPG1 666 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 A0A0A6YYH2 397 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 A6NJ64 397 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 HEPACAM2A8MVW5 462 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 OR2T1O43869 369 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 SNRNP70P08621 437 aaKnown RBP17.88■□□□□ 0.45
USP48-201ENST00000308271 SULT4A1Q9BR01 284 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 PTGES2Q9H7Z7 377 aa17.88■□□□□ 0.45
USP48-201ENST00000308271 TRIP11Q15643 1979 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 TSPAN11A1L157 253 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 A6NIZ1 184 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 SLC2A10O95528 541 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 OR10A3P58181 314 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 RAP1BP61224 184 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 RAP1AP62834 184 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 MRPL58Q14197 206 aaKnown RBP17.87■□□□□ 0.45
USP48-201ENST00000308271 PLPP6Q8IY26 295 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 NLGN4YQ8NFZ3 816 aaPredicted RBP17.87■□□□□ 0.45
USP48-201ENST00000308271 ICKQ9UPZ9 632 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 VASPP50552 380 aaPredicted RBP17.87■□□□□ 0.45
USP48-201ENST00000308271 SPOCK1Q08629 439 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 GPM6BQ13491 265 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 ZNF836Q6ZNA1 936 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 IL17RCQ8NAC3 791 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 OR51D1Q8NGF3 324 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 SERTM1A2A2V5 107 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 MED6O75586 246 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 GALP22466 123 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 HTR2CP28335 458 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 MMP15P51511 669 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 RASGRP3Q8IV61 690 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 SYS1Q8N2H4 156 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 OR5D14Q8NGL3 314 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 SMIM4Q8WVI0 70 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 TSACCQ96A04 125 aaPredicted RBP17.87■□□□□ 0.45
USP48-201ENST00000308271 SORCS2Q96PQ0 1159 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 HCFC1R1Q9NWW0 138 aa17.87■□□□□ 0.45
USP48-201ENST00000308271 A0A1B0GV50 99 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 RAD52P43351 418 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 RAG2P55895 527 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TIAL1Q01085 375 aaKnown RBP eCLIP17.86■□□□□ 0.45
USP48-201ENST00000308271 RPE65Q16518 533 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 HYAL4Q2M3T9 481 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 ZNF750Q32MQ0 723 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 FAM111BQ6SJ93 734 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 ZNF683Q8IZ20 524 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 POMT2Q9UKY4 750 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 KCNE1BA0A087WTH5 132 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TMPRSS11DO60235 418 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 SLC16A7O60669 478 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 CHRM4P08173 479 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 NTHL1P78549 312 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TMPRSS9Q7Z410 1059 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 OR6M1Q8NGM8 313 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 CCDC86Q9H6F5 360 aaKnown RBP17.86■□□□□ 0.45
USP48-201ENST00000308271 V9GYH0 126 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TUBG1P23258 451 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TNK1Q13470 666 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 COL9A2Q14055 689 aaPredicted RBP17.86■□□□□ 0.45
USP48-201ENST00000308271 HMGN3Q15651 99 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 SGCAQ16586 387 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 OR7E24Q6IFN5 339 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 C17orf107Q6ZR85 190 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 ZNF679Q8IYX0 411 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 BBS1Q8NFJ9 593 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 OR51S1Q8NGJ8 323 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 APOOQ9BUR5 198 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 NARFLQ9H6Q4 476 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 KCMF1Q9P0J7 381 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 EXO1Q9UQ84 846 aaKnown RBP17.86■□□□□ 0.45
USP48-201ENST00000308271 A0A0B4J2A0 478 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 TMEM200CA6NKL6 621 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 KDM4EB2RXH2 506 aaPredicted RBP17.86■□□□□ 0.45
USP48-201ENST00000308271 AIPO00170 330 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 IFNA1P01562 189 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 PDE7BQ9NP56 450 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 SHPKQ9UHJ6 478 aa17.86■□□□□ 0.45
USP48-201ENST00000308271 LRIT2A6NDA9 550 aa17.85■□□□□ 0.45
USP48-201ENST00000308271 CRTAPO75718 401 aaPredicted RBP17.85■□□□□ 0.45
USP48-201ENST00000308271 RGS11O94810 467 aa17.85■□□□□ 0.45
USP48-201ENST00000308271 ABLIM3O94929 683 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms