RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MMP7P09237 267 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 FGF7P21781 194 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GCH1P30793 250 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MAGEB1P43366 347 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 DAP3P51398 398 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GBX1Q14549 363 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 HSF5Q4G112 596 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MUC15Q8N387 334 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 PRSS35Q8N3Z0 413 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 OR2M7Q8NG81 312 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 OR4K14Q8NGD5 310 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 RPL10LQ96L21 214 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 NDFIP1Q9BT67 221 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ALG8Q9BVK2 526 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SPANXDQ9BXN6 97 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 DEC1Q9P2X7 70 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 V9GY05 133 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MEIKINA0A087WXM9 373 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ZAR1LA6NP61 321 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ABCD4O14678 606 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 NDUFS4O43181 175 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 EEF1E1O43324 174 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ADH4P08319 380 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 STAG3L2P0CL84 134 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 FAHP16930 419 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 NAGAP17050 411 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 PGCP20142 388 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CCKARP32238 428 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 AMTP48728 403 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 TAS2R38P59533 333 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 POU6F2P78424 691 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 HSPB3Q12988 150 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GRB7Q14451 532 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SLBPQ14493 270 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 NRARPQ7Z6K4 114 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GKN2Q86XP6 184 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 VRK2Q86Y07 508 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 PRSS58Q8IYP2 241 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ZCCHC10Q8TBK6 192 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 LRRN4Q8WUT4 740 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SGCZQ96LD1 299 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CXorf58Q96LI9 332 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MCHR1Q99705 422 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 TPPP3Q9BW30 176 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MRPS18AQ9NVS2 196 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 POMT2Q9UKY4 750 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 RGPD2P0DJD1 1756 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 K7EPK0 472 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 NDUFS6O75380 124 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GSTP1P09211 210 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CSN1S1P47710 185 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 LGALS4P56470 323 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 AANATQ16613 207 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 C1QTNF12Q5T7M4 302 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 FBXL22Q6P050 247 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 TBPL2Q6SJ96 375 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 COX15Q7KZN9 410 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 FAM71E2Q8N5Q1 922 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SLC5A8Q8N695 610 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SCLYQ96I15 445 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MRGPRX3Q96LB0 322 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 LRRC3BQ96PB8 259 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SLIRPQ9GZT3 109 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ZNF337Q9Y3M9 751 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 A0A1W2PPV4 95 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 AIFM1O95831 613 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CTRB1P17538 263 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 APEX1P27695 318 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 RAB11AP62491 216 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 LCN6P62502 163 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 GLO1Q04760 184 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CTRB2Q6GPI1 263 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CORO6Q6QEF8 472 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 SSX9Q7RTT3 188 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 DND1Q8IYX4 353 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CELF5Q8N6W0 485 aaKnown RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 C16orf78Q8WTQ4 265 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 ASB5Q8WWX0 329 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 C10orf35Q96D05 121 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 KLRG1Q96E93 195 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 UHRF2Q96PU4 802 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 TIMM29Q9BSF4 260 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 TMEM59Q9BXS4 323 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 FGFBP2Q9BYJ0 223 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MCOLN1Q9GZU1 580 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 DYNLRB1Q9NP97 96 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 MYOZ1Q9NP98 299 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-201ENST00000303395 CYSLTR2Q9NS75 346 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 HRH3Q9Y5N1 445 aa4.9□□□□□ -1.63
SCN1A-201ENST00000303395 HEATR5AQ86XA9 2040 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 LOC105369274A0A096LPK9 316 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 C7orf72A4D263 438 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 YJEFN3A6XGL0 299 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 FAM166BA8MTA8 275 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 KIAA1324LA8MWY0 1029 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SULT2B1O00204 365 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 MTX2O75431 263 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms