RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CDRT4Q8N9R6 151 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 OR5M3Q8NGP4 307 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ZFYVE21Q9BQ24 234 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 METTL17Q9H7H0 456 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 RPS6KB2Q9UBS0 482 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 IER3IP1Q9Y5U9 82 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 F8W036 122 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 SLC43A1O75387 559 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 IL9P15248 144 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 HK1P19367 917 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 GIFP27352 417 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 MTNR1BP49286 362 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 SELENOPP49908 381 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 CCR6P51684 374 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 OC90Q02509 493 aaPredicted RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 FCRL6Q6DN72 434 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 METAP1DQ6UB28 335 aaPredicted RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 LYPD4Q6UWN0 246 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 LNX2Q8N448 690 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 HSD17B8Q92506 261 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 WDR92Q96MX6 357 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 DDOQ99489 341 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 NUP210Q8TEM1 1887 aaPredicted RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 HCRTR1O43613 425 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 RAB3AP20336 220 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 EMDP50402 254 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 USP53Q70EK8 1073 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 LRRC28Q86X40 367 aaPredicted RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 BRIX1Q8TDN6 353 aaKnown RBP12.37□□□□□ -0.43
CTDP1-202ENST00000299543 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
CTDP1-202ENST00000299543 MFSD2BA6NFX1 497 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 GPR75O95800 540 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 LCN1P31025 176 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 PBX2P40425 430 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 LSSP48449 732 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 CSNK1A1LQ8N752 337 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 SFXN2Q96NB2 322 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 TIMP4Q99727 224 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 SARGQ9BW04 601 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 OR51J1Q9H342 316 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ANKRD61A6NGH8 418 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ADAM11O75078 769 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 RPP14O95059 124 aaKnown RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 DGCR2P98153 550 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 COL28A1Q2UY09 1125 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 PM20D2Q8IYS1 436 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 THAP4Q8WY91 577 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 SLC25A18Q9H1K4 315 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 CYSLTR2Q9NS75 346 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF223Q9UK11 482 aaPredicted RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 OR10H1Q9Y4A9 318 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 CACNG2Q9Y698 323 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 LAMA1P25391 3075 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 L7N2F9 121 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 HRKO00198 91 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 SOX30O94993 753 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 MT-ND4P03905 459 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 HIST1H1CP16403 213 aaKnown RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 EDNRAP25101 427 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 CLDN12P56749 244 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF85Q03923 595 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 KISS1RQ969F8 398 aaPredicted RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 RBM18Q96H35 190 aaKnown RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 OR14A2Q96R54 314 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF346Q9UL40 294 aaKnown RBP12.36□□□□□ -0.43
CTDP1-202ENST00000299543 TRBV2A0A0J9YWF9 115 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 IDSB3KWA1 339 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 STX4Q12846 297 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 KIR2DS3Q14952 304 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 CEBPEQ15744 281 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ODF4Q2M2E3 257 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ELP2Q6IA86 826 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF527Q8NB42 609 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 BMFQ96LC9 184 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 CACNG6Q9BXT2 260 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 LDAHQ9H6V9 325 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms