RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CORINQ9Y5Q5 1042 aa22.16■■□□□ 1.14
GTF2A1-201ENST00000298173 OPN1LWP04000 364 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 FOXK2Q01167 660 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 RPL18Q07020 188 aaKnown RBP22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 C19orf57Q0VDD7 668 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 RBM48Q5RL73 367 aaKnown RBP22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 BORAQ6PGQ7 559 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 LRRC69Q6ZNQ3 347 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 NANOGNBQ7Z5D8 188 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 SNRNP27Q8WVK2 155 aaKnown RBP22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 ZNF566Q969W8 418 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 RELTQ969Z4 430 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 SLC38A2Q96QD8 506 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 IL4I1Q96RQ9 567 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 QPCTLQ9NXS2 382 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 TRAPPC4Q9Y296 219 aa22.15■■□□□ 1.14
GTF2A1-201ENST00000298173 TAF4O00268 1085 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 ARPC3O15145 178 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 CRHBPP24387 322 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 UCNP55089 124 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 OR7A5Q15622 319 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 SMN1Q16637 294 aaKnown RBP22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 TMEM201Q5SNT2 666 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 SCAIQ8N9R8 606 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 TM9SF4Q92544 642 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 TEX12Q9BXU0 123 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 PRRG3Q9BZD7 231 aa22.14■■□□□ 1.14
GTF2A1-201ENST00000298173 M0R082 166 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 PLPP3O14495 311 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 TLX2O43763 284 aaPredicted RBP22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 PPP1R3DO95685 299 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 CCDC159P0C7I6 412 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 SFTPDP35247 375 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 MAGEA5P43359 124 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 TMPRSS3P57727 454 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 KCTD21Q4G0X4 260 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 ALG10Q5BKT4 473 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 TMPPEQ6ZT21 453 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 ZADH2Q8N4Q0 377 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF417Q8TAU3 575 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 MIB2Q96AX9 1013 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 OR5B2Q96R09 309 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF587Q96SQ5 575 aaPredicted RBP22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 ASPNQ9BXN1 380 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 MFRPQ9BY79 579 aa22.14■■□□□ 1.13
GTF2A1-201ENST00000298173 A0A087WV48 116 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 A0A1W2PNR3 127 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 C1QTNF9BB2RNN3 333 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 LINC01387J3KSC0 135 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC1A7O00341 560 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PDGFAP04085 211 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 CELA3AP09093 270 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 C1QTNF9P0C862 333 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 APEHP13798 732 aaKnown RBP22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 FMO3P31513 532 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PPIAP62937 165 aaKnown RBP22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PLGLB1Q02325 96 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 ZP4Q12836 540 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 TOP3AQ13472 1001 aaPredicted RBP22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 OCLNQ16625 522 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 IGFN1Q86VF2 1251 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 TMEM163Q8TC26 289 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 TAPBPLQ9BX59 468 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 ACKR4Q9NPB9 350 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PLCXD1Q9NUJ7 323 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 ALKBH4Q9NXW9 302 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PCDHGB7Q9Y5F8 929 aa22.13■■□□□ 1.13
GTF2A1-201ENST00000298173 PTPRQQ9UMZ3 2332 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 FAM166BA8MTA8 275 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 MS4A18H0YCH9 400 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC2A10O95528 541 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 CD14P08571 375 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 RPL4P36578 427 aaKnown RBP22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 CSNK2BP67870 215 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 PMS2P3Q13401 168 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 TBR1Q16650 682 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 MS4A18Q3C1V0 323 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 RNFT1Q5M7Z0 435 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 H1FNTQ75WM6 255 aaPredicted RBP22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 FAM122BQ7Z309 247 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC22A16Q86VW1 577 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 SFXN2Q96NB2 322 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 FANCFQ9NPI8 374 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 CMC2Q9NRP2 79 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 IER3IP1Q9Y5U9 82 aa22.12■■□□□ 1.13
GTF2A1-201ENST00000298173 SH3D21A4FU49 640 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 IDH3BO43837 385 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 PMS2P2O95744 297 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 DIO1P49895 249 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 ZNF239Q16600 458 aaKnown RBP22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 SLC35F1Q5T1Q4 408 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 BPIFB6Q8NFQ5 453 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 ERMAPQ96PL5 475 aaPredicted RBP22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 KATNB1Q9BVA0 655 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 B3GALT5Q9Y2C3 310 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 ADAM18Q9Y3Q7 739 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 MGAQ8IWI9 3026 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 A0A0J9YW62 118 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 GJE1A6NN92 205 aa22.11■■□□□ 1.13
GTF2A1-201ENST00000298173 XPNPEP2O43895 674 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms