RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 BDKRB2P30411 391 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CCSMST1Q4G0I0 132 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 OR4N4Q8N0Y3 316 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 OR6T1Q8NGN1 323 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SLC25A31Q9H0C2 315 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SULT1C2O00338 296 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 LGI1O95970 557 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 UBBP0CG47 229 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 MBTPS1Q14703 1052 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 UBE2UQ5VVX9 321 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SFXN4Q6P4A7 337 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SLC16A9Q7RTY1 509 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 LMNTD1Q8N9Z9 388 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 BEST4Q8NFU0 473 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 NLGN4YQ8NFZ3 816 aaPredicted RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 GHSRQ92847 366 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM68Q96MH6 324 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 RBFOX1Q9NWB1 397 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SULT1B1O43704 296 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 GPR137BO60478 399 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 PEX14O75381 377 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CAV2P51636 162 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 PYCR3Q53H96 274 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 EID2Q8N6I1 236 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 RPL3LQ92901 407 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 MS4A6EQ96DS6 147 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CAMK2AQ9UQM7 478 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 OR5K3A6NET4 321 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 DPM1O60762 260 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 OR8G3PP0DMU2 310 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 GPLD1P80108 840 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 DUSP6Q16828 381 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ARHGAP11BQ3KRB8 267 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 APOOLQ6UXV4 268 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 BPIFB2Q8N4F0 458 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 DUSP19Q8WTR2 217 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF286AQ9HBT8 521 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 RCE1Q9Y256 329 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 CDC14CA4D256 554 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 CD300LBA8K4G0 201 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 A8MVM7 634 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 D6RAR5 112 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TRAPPC2LH3BP13 241 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 MRPL33O75394 65 aaKnown RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 GABRR1P24046 479 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 HTR2CP28335 458 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SLC22A6Q4U2R8 563 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 AGAP7PQ5VUJ5 663 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 PRICKLE2Q7Z3G6 844 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SGPP1Q9BX95 441 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 C19orf53Q9UNZ5 99 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM72A0PK05 275 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 NUDT21O43809 227 aaKnown RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 WDPCPO95876 746 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 IL20RBQ6UXL0 311 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SMAP2Q8WU79 429 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM255BQ8WV15 326 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 PLCXD1Q9NUJ7 323 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 GPR160Q9UJ42 338 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 PCDHGA6Q9Y5G7 932 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM129A0AVI4 362 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SPDEFO95238 335 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ITGB2P05107 769 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 CTHP32929 405 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ALKBH1Q13686 389 aaKnown RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM176BQ3YBM2 270 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 GPR157Q5UAW9 335 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SH2D5Q6ZV89 423 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 LACC1Q8IV20 430 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 C22orf15Q8WYQ4 148 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SLC6A18Q96N87 628 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 NOX4Q9NPH5 578 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ASF1BQ9NVP2 202 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 VSX1Q9NZR4 365 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 A0A0D9SG52 128 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF195O14628 629 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 ACTL6BO94805 426 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 GLCEO94923 617 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 PRPH2P23942 346 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 CRMP1Q14194 572 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 Q6ZNB5 142 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 RFPL4BQ6ZWI9 263 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 LILRA3Q8N6C8 439 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 KCNG3Q8TAE7 436 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms