RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF724A8MTY0 619 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 M0R143 59 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 FFAR2O15552 330 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 RPP40O75818 363 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NSA2O95478 260 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 IFNW1P05000 195 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TMIGD3P0DMS9 266 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 PTHLHP12272 177 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 LMO2P25791 158 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 HOXC12P31275 282 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 GALNSP34059 522 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 APLNRP35414 380 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 DLSTP36957 453 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CASRP41180 1078 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SRSF11Q05519 484 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TAF13Q15543 124 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SBSNQ6UWP8 590 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 LINGO4Q6UY18 593 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NFKBIDQ8NI38 313 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NUDCD2Q8WVJ2 157 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ASB13Q8WXK3 278 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 APOLD1Q96LR9 279 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 EBPLQ9BY08 206 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SLC6A16Q9GZN6 736 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 P2RY12Q9H244 342 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SPHK2Q9NRA0 654 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 FBXW2Q9UKT8 454 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 A0A1W2PPE2 198 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TSPAN3O60637 253 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NDUFS3O75489 264 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CD8AP01732 235 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 PIRTP0C851 137 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 COX7A2P14406 83 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 OR1E1P30953 314 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ACVRL1P37023 503 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SLC6A11P48066 632 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CDKN1CP49918 316 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CDK5Q00535 292 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TMEM115Q12893 351 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SCARB2Q14108 478 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF234Q14588 700 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NKPD1Q17RQ9 610 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 HYAL4Q2M3T9 481 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ARSJQ5FYB0 599 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CST9Q5W186 159 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ADNP2Q6IQ32 1131 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 HEPN1Q6WQI6 88 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SLC36A4Q6YBV0 504 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 OR13C3Q8NGS6 347 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 FCAMRQ8WWV6 532 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CHST6Q9GZX3 395 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 IL21RQ9HBE5 538 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 POT1Q9NUX5 634 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 FAM120CQ9NX05 1096 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ABRACLQ9P1F3 81 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 PRODH2Q9UF12 536 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF337Q9Y3M9 751 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 KCNAB3O43448 404 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 CA11O75493 328 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 NXPH2O95156 264 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 MMP2P08253 660 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 METTL15P1P0C7V9 234 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ST6GAL1P15907 406 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 MAS1LP35410 378 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SULT1A1P50225 295 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ZDHHC20Q5W0Z9 365 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 TTLL10Q6ZVT0 673 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 OR8J2Q8NGG1 315 aa8.49□□□□□ -1.05
PDGFC-201ENST00000274071 BRIX1Q8TDN6 353 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 SMG9Q9H0W8 520 aaKnown RBP8.49□□□□□ -1.05
PDGFC-201ENST00000274071 ZSWIM8A7E2V4 1837 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CEP350Q5VT06 3117 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 M0R036 132 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 AGPAT2O15120 278 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SLC25A4P12235 298 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 DHPSP49366 369 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 IRF8Q02556 426 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CNTN1Q12860 1018 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SLC9A5Q14940 896 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST2H3PS2Q5TEC6 136 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 NOXRED1Q6NXP6 359 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PEG10Q86TG7 708 aaKnown RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 JAGN1Q8N5M9 183 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 ACBD4Q8NC06 268 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 OR10A7Q8NGE5 316 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SECTM1Q8WVN6 248 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 RGP1Q92546 391 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PPCDCQ96CD2 204 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PIK3IP1Q96FE7 263 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 KIRREL1Q96J84 757 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SMAD5Q99717 465 aaKnown RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 ADAM19Q9H013 955 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 NT5MQ9NPB1 228 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms