RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 HAO2Q9NYQ3 351 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 PPP4R1LQ9P1A2 415 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 TMED7Q9Y3B3 224 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 CHCHD2Q9Y6H1 151 aaPredicted RBP13.92□□□□□ -0.18
COPS3-201ENST00000268717 SLC22A1O15245 554 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 ZNF208O43345 1280 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 OR2T1O43869 369 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 SUSD5O60279 629 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 ATE1O95260 518 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 TXNDC12O95881 172 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 IGHA1P01876 353 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 BGLAPP02818 100 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 PRKCAP17252 672 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 PCSK6P29122 969 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 NOS3P29474 1203 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 SOX3P41225 446 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 CASP3P42574 277 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 ITGADQ13349 1161 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 C1DQ13901 141 aaKnown RBP13.91□□□□□ -0.18
COPS3-201ENST00000268717 EMC4Q5J8M3 183 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 FAM69AQ5T7M9 428 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 H3F3CQ6NXT2 135 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 RPS19BP1Q86WX3 136 aaKnown RBP13.91□□□□□ -0.18
COPS3-201ENST00000268717 ADGRG3Q86Y34 549 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 LRRC17Q8N6Y2 441 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 LRRC75AQ8NAA5 344 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 PSD4Q8NDX1 1056 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 KTI12Q96EK9 354 aaPredicted RBP13.91□□□□□ -0.18
COPS3-201ENST00000268717 ERMAPQ96PL5 475 aaPredicted RBP13.91□□□□□ -0.18
COPS3-201ENST00000268717 GALNT9Q9HCQ5 603 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 SH2D2AQ9NP31 389 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 ISYNA1Q9NPH2 558 aa13.91□□□□□ -0.18
COPS3-201ENST00000268717 ATRXP46100 2492 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 C17orf51A8MQB3 221 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MCIDASD6RGH6 385 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MYL12BO14950 172 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 AHCYL1O43865 530 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 FZD7O75084 574 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 SERPINA7P05543 415 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 CD36P16671 472 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 SLC2A5P22732 501 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 LIPAP38571 399 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 LTBQ06643 244 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 NFATC3Q12968 1075 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MFSD13AQ14CX5 517 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 SPHARQ15513 63 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 ARMCX4Q5H9R4 360 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 PLBD1Q6P4A8 553 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MAMDC2Q7Z304 686 aaPredicted RBP13.9□□□□□ -0.18
COPS3-201ENST00000268717 NANOGNBQ7Z5D8 188 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 RAB43Q86YS6 212 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 FADS6Q8N9I5 356 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 SLC37A3Q8NCC5 494 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 ASB15Q8WXK1 588 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 TAAR8Q969N4 342 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MRGPRX4Q96LA9 322 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 IP6K3Q96PC2 410 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MOGAT1Q96PD6 335 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 MGLLQ99685 303 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 PTDSS2Q9BVG9 487 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 INPP5EQ9NRR6 644 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 FBXL4Q9UKA2 621 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 PCNX3Q9H6A9 2034 aa13.9□□□□□ -0.18
COPS3-201ENST00000268717 TMEM72A0PK05 275 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 ANKRD33BA6NCL7 494 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 J3QRE1 110 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 HIST1H2ABP04908 130 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 SCG5P05408 212 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 CELA2AP08217 269 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 CD14P08571 375 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 WT1P19544 449 aaPredicted RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 OTX2P32243 289 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 RPL4P36578 427 aaKnown RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 RPS18P62269 152 aaKnown RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.9□□□□□ -0.19
COPS3-201ENST00000268717 POU4F2Q12837 409 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 MLLT11Q13015 90 aaPredicted RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 CRMP1Q14194 572 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 SGCBQ16585 318 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 TIMM50Q3ZCQ8 353 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 SLC35F1Q5T1Q4 408 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 JMJD6Q6NYC1 403 aaPredicted RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 HIST3H2AQ7L7L0 130 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 GPALPP1Q8IXQ4 340 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 C10orf53Q8N6V4 93 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 BBS1Q8NFJ9 593 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 HIST1H2ACQ93077 130 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 PTP4A1Q93096 173 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 SGCZQ96LD1 299 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 UBL7Q96S82 380 aaPredicted RBP13.9□□□□□ -0.19
COPS3-201ENST00000268717 TAS2R16Q9NYV7 291 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 IER3IP1Q9Y5U9 82 aa13.9□□□□□ -0.19
COPS3-201ENST00000268717 A0A087WZY1 265 aa13.89□□□□□ -0.19
COPS3-201ENST00000268717 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
COPS3-201ENST00000268717 AHSA1O95433 338 aa13.89□□□□□ -0.19
COPS3-201ENST00000268717 LIFP15018 202 aa13.89□□□□□ -0.19
COPS3-201ENST00000268717 PAX7P23759 505 aa13.89□□□□□ -0.19
COPS3-201ENST00000268717 FKBP2P26885 142 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms