RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TEX13CA0A0J9YWL9 993 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 C4orf47A7E2U8 309 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 HPGDSO60760 199 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 GLCEO94923 617 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 WISP1O95388 367 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 HLA-DQB1P01920 261 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 BGLAPP02818 100 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 PTBP1P26599 531 aaKnown RBP eCLIP17.41■□□□□ 0.38
YBX3-201ENST00000228251 SHC1P29353 583 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 FOXL2P58012 376 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 ACTA2P62736 377 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 ACTG2P63267 376 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 ASAH1Q13510 395 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 TOMM34Q15785 309 aaPredicted RBP17.41■□□□□ 0.38
YBX3-201ENST00000228251 FAM27D1Q5T7N8 215 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 HLA-DQA1Q5Y7H0 255 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 IL17RDQ8NFM7 739 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 STT3BQ8TCJ2 826 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 TAAR8Q969N4 342 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 RNF166Q96A37 237 aaPredicted RBP17.41■□□□□ 0.38
YBX3-201ENST00000228251 SYNDIG1Q9H7V2 258 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 COMMD3Q9UBI1 195 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 PPIEQ9UNP9 301 aaKnown RBP17.41■□□□□ 0.38
YBX3-201ENST00000228251 ADAMTS9Q9P2N4 1935 aa17.41■□□□□ 0.38
YBX3-201ENST00000228251 CDC40O60508 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
YBX3-201ENST00000228251 SELENOFO60613 162 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 TIAF1O95411 115 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 SDHAP31040 664 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 PYCR1P32322 319 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 DHPSP49366 369 aaPredicted RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 SLC3A1Q07837 685 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 CDK5R1Q15078 307 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 NR0B2Q15466 257 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 TP53I3Q53FA7 332 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 ALG10Q5BKT4 473 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 ZNF684Q5T5D7 378 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 ZNF385CQ66K41 422 aaPredicted RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 CNIH2Q6PI25 160 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 NRARPQ7Z6K4 114 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 ACOT12Q8WYK0 555 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 GHSRQ92847 366 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 FKRPQ9H9S5 495 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 NCDNQ9UBB6 729 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 PCDHGB7Q9Y5F8 929 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 BLOC1S5-TXNDC5H3BN57 136 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 HCRTR2O43614 444 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 NPIPB7O75200 414 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 RPS11P62280 158 aaKnown RBP eCLIP17.4■□□□□ 0.38
YBX3-201ENST00000228251 ACY1Q03154 408 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 HSF2Q03933 536 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 RPL18Q07020 188 aaKnown RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 HBMQ6B0K9 141 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 WDR5BQ86VZ2 330 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 MS4A15Q8N5U1 240 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 CELF2-AS1Q8N7Q2 184 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 APCDD1LQ8NCL9 501 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 OR4D9Q8NGE8 314 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 TP53INP1Q96A56 240 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 SMIM19Q96E16 107 aa17.4■□□□□ 0.38
YBX3-201ENST00000228251 CCDC86Q9H6F5 360 aaKnown RBP17.4■□□□□ 0.38
YBX3-201ENST00000228251 OR6C70A6NIJ9 312 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 MAGEB4O15481 346 aaPredicted RBP17.39■□□□□ 0.37
YBX3-201ENST00000228251 NDUFB5O43674 189 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 SIGLEC6O43699 453 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 APOA1P02647 267 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 CTXN1P60606 82 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 EMC4Q5J8M3 183 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 LEG1Q6P5S2 330 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 LYPD4Q6UWN0 246 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 SPATC1Q76KD6 591 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 ANKRD37Q7Z713 158 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 LSM14AQ8ND56 463 aaKnown RBP17.39■□□□□ 0.37
YBX3-201ENST00000228251 ZNF563Q8TA94 476 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 KCTD12Q96CX2 325 aaKnown RBP17.39■□□□□ 0.37
YBX3-201ENST00000228251 PTDSS2Q9BVG9 487 aa17.39■□□□□ 0.37
YBX3-201ENST00000228251 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
YBX3-201ENST00000228251 IGHV5-10-1A0A0J9YXX1 117 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 PRR32B1ATL7 298 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 EVI2BP34910 448 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 ACVR1BP36896 505 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 RNF4P78317 190 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 SIRPAP78324 504 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 CCL7P80098 99 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 MESTQ5EB52 335 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 MZT2AQ6P582 158 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 CEACAM19Q7Z692 300 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 NEDD4LQ96PU5 975 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TSPAN32Q96QS1 320 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 MESP1Q9BRJ9 268 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 ALG12Q9BV10 488 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 MFRPQ9BY79 579 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 IGHV3-20A0A0C4DH32 117 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 SNPHO15079 494 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TMCC2O75069 709 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 PGCP20142 388 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 APEX1P27695 318 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms