RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DNASE1L1P49184 302 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CLDN20P56880 219 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 OR2T35Q8NGX2 323 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 GON7Q9BXV9 100 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 DHCR7Q9UBM7 475 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF281Q9Y2X9 895 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 NOX1Q9Y5S8 564 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 UNC13CQ8NB66 2214 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 AHSA1O95433 338 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 SPI1P17947 270 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 GDNFP39905 211 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ART1P52961 327 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CDK5R1Q15078 307 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF782Q6ZMW2 699 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 SHISA6Q6ZSJ9 500 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 BCORP1Q8N888 145 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ASB12Q8WXK4 309 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 PMM1Q92871 262 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 TCTN2Q96GX1 697 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 LMF2Q9BU23 707 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 KLHL9Q9P2J3 617 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 KCNE5Q9UJ90 142 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF264O43296 627 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 GPRIN2O60269 458 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 GATBO75879 557 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 FGFBP1Q14512 234 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 DPY19L4Q7Z388 723 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 CDH24Q86UP0 819 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 OR10H5Q8NGA6 315 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 SYNPRQ8TBG9 265 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 DNAJB12Q9NXW2 375 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 OR7A10O76100 309 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 TSPAN5P62079 268 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 PSG6Q00889 435 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF627Q7L945 461 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 ADAMTS14Q8WXS8 1223 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 SMIM19Q96E16 107 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 DPCDQ9BVM2 203 aaPredicted RBP13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 PPP1R3EQ9H7J1 279 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 EVA1AQ9H8M9 152 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 TMEM14AQ9Y6G1 99 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 SHISA3A0PJX4 238 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 TNFSF14O43557 240 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 PLPP2O43688 288 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 TACR3P29371 465 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 CCKBRP32239 447 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 NKAIN2Q5VXU1 208 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 Q6ZS52 159 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 POMT2Q9UKY4 750 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 CA14Q9ULX7 337 aa13.72□□□□□ -0.21
UBE2D4-201ENST00000222402 AKR7A2O43488 359 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 RFPL3O75679 317 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 CD14P08571 375 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 HOXC4P09017 264 aaPredicted RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 LCN1P31025 176 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 GNALP38405 381 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 GZMKP49863 264 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 DGAT2L6Q6ZPD8 337 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 NUP54Q7Z3B4 507 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 OR8S1Q8NH09 359 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 GIMAP1Q8WWP7 306 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 DAZLQ92904 295 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 GCDHQ92947 438 aaPredicted RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 ANKRD9Q96BM1 317 aaPredicted RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 TM4SF19Q96DZ7 209 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 PELI1Q96FA3 418 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 ACTR6Q9GZN1 396 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 SPTY2D1-AS1A0A0U1RR47 76 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 ANKRD34BA5PLL1 514 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 EIF1AYO14602 144 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 SRMP19623 302 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 EIF1AXP47813 144 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 DIO1P49895 249 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 ZP2Q05996 745 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 KCNAB1Q14722 419 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 TAF13Q15543 124 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 OTPQ5XKR4 325 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 JAGN1Q8N5M9 183 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 MCCC2Q9HCC0 563 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
UBE2D4-201ENST00000222402 TRABD2BA6NFA1 517 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 RBBP9O75884 186 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 ATF1P18846 271 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 TBXA2RP21731 343 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 SSX6Q7RTT6 188 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 MRGPREQ86SM8 312 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 KLHL15Q96M94 604 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 ABHD1Q96SE0 405 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 SYT4Q9H2B2 425 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 NIPAL2Q9H841 368 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms