RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Zfp189Q8BKP2 608 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Defb22Q8BVC1 179 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 NdnfQ8C119 568 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc35a3Q8R1T4 326 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pcolce2Q8R4W6 414 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr518Q8VEW1 333 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tcam1Q99NB3 548 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Teddm3Q9CQH1 294 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Raet1eQ9CZQ6 251 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem269Q9D4Y8 254 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rpl22l1Q9D7S7 122 aaKnown RBP9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Isyna1Q9JHU9 557 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lpar2Q9JL06 348 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lao1B1ARV3 523 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r68E9Q0V3 319 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Kcnk2P97438 426 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nrsn1P97799 196 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Q3V0E1 1183 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm11492Q5ND19 536 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cdkn2dQ60773 166 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam76bQ80XP8 339 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slco4c1Q8BGD4 722 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam155aQ8CCS2 467 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gpat4Q8K2C8 456 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Otud7aQ8R554 926 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr668Q8VGW3 318 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rtn4ip1Q924D0 396 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r40Q9EQ46 310 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Elovl4Q9EQC4 312 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Moap1Q9ERH6 352 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Qtrt1Q9JMA2 403 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr634-ps1A0A1B0GRN7 318 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rhox2fA2ANE0 191 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 CgaP01216 120 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Znf703P0CL69 594 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Evx2P49749 475 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Itgb8Q0VBD0 767 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dtx3lQ3UIR3 748 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tas2r120Q7M721 295 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Atg4bQ8BGE6 393 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hcar1Q8C131 343 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Plekhn1Q8C886 359 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mtnr1bQ8CIQ6 364 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tor2aQ8R1J9 321 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zdhhc5Q8VDZ4 715 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1254Q8VFB1 314 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Oas1hQ8VI97 369 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ubl7Q91W67 380 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fuca1Q99LJ1 452 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gtpbp8Q9CY28 285 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Klhdc8bQ9D2D9 354 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 AireQ9Z0E3 552 aa9.6□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Scn9aQ62205 1984 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm13124A2A752 406 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Obp1bA2AEP0 171 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm14743A2BHD2 171 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Skint2A7XUX6 400 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 C9P06683 548 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 LcatP16301 438 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Eci1P42125 289 aaKnown RBP9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cdh26P59862 763 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc10a2P70172 348 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Q3TTL0 348 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pnpla1Q3V1D5 599 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 BadQ61337 204 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mettl20Q80ZM3 255 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tbl1xr1Q8BHJ5 514 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc6a17Q8BJI1 727 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Crlf2Q8CII9 359 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Babam2Q8K3W0 383 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r74Q8R290 304 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gpn1Q8VCE2 372 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr135Q8VEY4 312 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr781Q8VFZ8 311 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Frs3Q91WJ0 492 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem63aQ91YT8 804 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mrgpra7Q91ZC5 305 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc24a3Q99PD7 645 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pex13Q9D0K1 405 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ppil3Q9D6L8 161 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hsd17b11Q9EQ06 298 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ca5bQ9QZA0 317 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fbxo8Q9QZN3 319 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Prdm14E9Q3T6 561 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm6526G3X9Q9 198 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Shisa8J3QNX5 399 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hbb-bh1P04444 147 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 P06321 130 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nid1P10493 1245 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Npbwr1P49681 329 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Atxn1P54254 791 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rps25P62852 125 aaKnown RBP9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gng8P63078 70 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Doc2bP70169 412 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zfp39Q02525 718 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lpar5Q149R9 372 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Foxred1Q3TQB2 487 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Them4Q3UUI3 230 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 E2f1Q61501 430 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Klhl9Q6ZPT1 617 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms