RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Nxt1Q9QZV9 140 aa11.16□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Col11a1Q61245 1804 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 UtrnE9Q6R7 3430 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr1315-ps1A0A140LI66 314 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vmn2r49D3Z6L3 852 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 H2-M11F6U8V3 335 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vmn2r32K7N686 852 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vmn2r42O35192 852 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Hsd3b3P26150 373 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Foxk2Q3UCQ1 651 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Trpc5osQ3UHV4 110 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vamp1Q62442 118 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Prr5Q812A5 387 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Oxa1lQ8BGA9 433 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Slc35f4Q8BZK4 485 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Mrpl48Q8JZS9 211 aaKnown RBP11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Slc16a14Q8K1C7 512 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Mnd1Q8K396 205 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 MepeQ8K4L6 441 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr1316Q8VG12 314 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr539Q8VGL9 319 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr1233Q8VGN0 305 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Usb1Q91W78 267 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Pex16Q91XC9 336 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Abhd17aQ99JW1 310 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Q99K99 313 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Emc6Q9CQW0 110 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Q9D4W2 315 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Nrip3Q9JJR9 240 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Clca3a1Q9QX15 902 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Hacl1Q9QXE0 581 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Znf346Q9R0B7 294 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Rab25Q9WTL2 213 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Gm5799E9Q2M1 201 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Slc22a1O08966 556 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Rpl18P35980 188 aaKnown RBP11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 MplQ08351 625 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vmn1r11Q3SXA2 299 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr1252Q7TQZ2 314 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Mterf3Q8R3J4 412 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Olfr1052Q8VGR8 312 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Vmn1r43Q8VIC9 329 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Metap1dQ9CPW9 335 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Pop4Q9CR08 221 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Sema6cQ9WTM3 931 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Aloxe3Q9WV07 711 aa11.15□□□□□ -0.62
Ctr9-201ENSMUST00000005749 Gm13420A0A140LJJ2 248 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Skint4A7TZF3 474 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Gm15155B1B034 138 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Gm8126E9Q1N7 198 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 H2-M1F7CXU4 344 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Nipsnap2O55126 281 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Slc19a1P41438 512 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 InipQ3TXT3 104 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Amz2Q400C8 359 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 OmgQ63912 440 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 SpicQ6P3D7 242 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Lrrtm2Q8BGA3 515 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Gykl1Q8C635 549 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Arel1Q8CHG5 823 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Tmem268Q8R239 342 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Olfr1100Q8VFM1 321 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Tcam1Q99NB3 548 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Sgk3Q9ERE3 496 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Pard6gQ9JK84 382 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Nupr1Q9WTK0 80 aa11.15□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Prr36E9PV26 1098 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Gm8020F6WLE9 229 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Npbwr1P49681 329 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Tuba4aP68368 448 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Elavl1P70372 326 aaKnown RBP11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 BmxP97504 651 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Galnt2Q6PB93 570 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Olfr1045Q7TR80 315 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Q8C4P0 716 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Spem2Q8C5U4 503 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Vmn1r210Q8R274 306 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Plpp7Q91WB2 271 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Olfr619E9PV95 320 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Slc10a1O08705 362 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Myf6P15375 242 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 FasP25446 327 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Cdh10P70408 788 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Olfr125Q14AJ9 320 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Mccc2Q3ULD5 563 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Sgpp2Q810K3 354 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Gprin3Q8BWS5 763 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Vmn1r198Q8R263 300 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Cdca3Q99M54 266 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Nsa2Q9CR47 260 aaKnown RBP11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Sapcd1Q9CY86 146 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 TrirQ9D735 173 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Foxo1Q9R1E0 652 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Slc25a34A2ADF7 318 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Olfr430E9Q5F1 317 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Prps1l3G3UXL2 318 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 PpibP24369 216 aaKnown RBP11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Stt3aP46978 705 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Crmp1P97427 572 aa11.14□□□□□ -0.63
Ctr9-201ENSMUST00000005749 Rnase12Q5GAM8 145 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms