RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TERB2Q8NHR7 220 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 CR2P20023 1033 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 RAB4AP20338 218 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 BMPR1AP36894 532 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 MELKQ14680 651 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 FAM57BQ71RH2 274 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 SLC35D2Q76EJ3 337 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TEX19Q8NA77 164 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PXT1Q8NFP0 134 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 BADQ92934 168 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 OR51B6Q9H340 312 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 UBQLN4Q9NRR5 601 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 ARGFXA6NJG6 315 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TAPBPO15533 448 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 OR2T7P0C7T2 308 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PKLRP30613 574 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 POU3F1Q03052 451 aaPredicted RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 HENMT1Q5T8I9 393 aaKnown RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 OR5M10Q6IEU7 315 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 FAM160A2Q8N612 972 aaPredicted RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 L3MBTL4Q8NA19 623 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 OR2T27Q8NH04 317 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PKMYT1Q99640 499 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PUS1Q9Y606 427 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TMEM212A6NML5 194 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 ACTL6BO94805 426 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 HTR1FP30939 366 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 UBE2KP61086 200 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 EBPQ15125 230 aaKnown RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 C11orf91Q3C1V1 193 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 ALG12Q9BV10 488 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 MCOLN1Q9GZU1 580 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 SLC22A7Q9Y694 548 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 HTR2CP28335 458 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 RPS19P39019 145 aaKnown RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PRDX1Q06830 199 aaKnown RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 MFSD9Q8NBP5 474 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 NUDT22Q9BRQ3 303 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 SCML1Q9UN30 329 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 PRSS38A1L453 326 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 ANKRD30BLA7E2S9 258 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 DBPQ10586 325 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-213ENST00000638680 HIST2H3PS2Q5TEC6 136 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 TMEM255BQ8WV15 326 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 SFXN2Q96NB2 322 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 CRB3Q9BUF7 120 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 HBQ1P09105 142 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 RPS15P62841 145 aaKnown RBP17.19■□□□□ 0.34
SCARB2-213ENST00000638680 MORN1Q5T089 497 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 ALKAL1Q6UXT8 129 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 PRICKLE2Q7Z3G6 844 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 BORCS7Q96B45 105 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 INSM2Q96T92 566 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-213ENST00000638680 WDR83Q9BRX9 315 aaKnown RBP17.19■□□□□ 0.34
SCARB2-213ENST00000638680 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 NCDNQ9UBB6 729 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 KIF25Q9UIL4 384 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 NME2P22392 152 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 SLC22A25Q6T423 547 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 SAMD10Q9BYL1 202 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 RFLNAQ6ZTI6 216 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 MOB3CQ70IA8 216 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 MRPL41Q8IXM3 137 aaKnown RBP17.19■□□□□ 0.34
SCARB2-213ENST00000638680 TMEFF1Q8IYR6 380 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 PCDHGA1Q9Y5H4 931 aa17.19■□□□□ 0.34
SCARB2-213ENST00000638680 PRAMEF27A3QJZ7 478 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 SCGB2A1O75556 95 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 SRP9P49458 86 aaKnown RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 MPEG1Q2M385 716 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 PRAMEF9Q5VWM5 478 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 ZNF416Q9BWM5 594 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 SLC46A2Q9BY10 475 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 C8orf33Q9H7E9 229 aaPredicted RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 APEHP13798 732 aaKnown RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 HOXD9P28356 352 aaPredicted RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 HLA-FP30511 346 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 SLCO4C1Q6ZQN7 724 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 RSC1A1Q92681 617 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 DVL3Q92997 716 aaPredicted RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 MBOAT4Q96T53 435 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 RNF167Q9H6Y7 350 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 SLAMF7Q9NQ25 335 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 CAMK2AQ9UQM7 478 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 E9PI62 339 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 TOR1AO14656 332 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 PRKRAO75569 313 aaKnown RBP17.18■□□□□ 0.34
SCARB2-213ENST00000638680 MAKP20794 623 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 FOXK2Q01167 660 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 LTB4RQ15722 352 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 Q499Y3 187 aa17.18■□□□□ 0.34
SCARB2-213ENST00000638680 YIF1BQ5BJH7 314 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms