RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 SLC1A3P43003 542 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 NRG3P56975 720 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 COPZ1P61923 177 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 PLCXD2Q0VAA5 305 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 TMEM239Q8WW34 195 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 TM9SF4Q92544 642 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 ITPKCQ96DU7 683 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 THOC3Q96J01 351 aaKnown RBP18.17■□□□□ 0.5
CLN8-208ENST00000635751 SAMD8Q96LT4 415 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 FER1L6-AS2Q96M78 137 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 CCNL2Q96S94 520 aaPredicted RBP18.17■□□□□ 0.5
CLN8-208ENST00000635751 ARHGAP9Q9BRR9 750 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 G6PC3Q9BUM1 346 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 CCDC32Q9BV29 185 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 CDCP1Q9H5V8 836 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 ATP13A2Q9NQ11 1180 aa18.17■□□□□ 0.5
CLN8-208ENST00000635751 EXOGQ9Y2C4 368 aaKnown RBP18.17■□□□□ 0.5
CLN8-208ENST00000635751 IQCMA0A1B0GVH7 501 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 IL33O95760 270 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 DEFA1P59665 94 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 DEFA3P59666 94 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 DESI1Q6ICB0 168 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 SHFQ7M4L6 423 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 SIRT6Q8N6T7 355 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 OR52L1Q8NGH7 329 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 FANK1Q8TC84 345 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 THAP4Q8WY91 577 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 OMA1Q96E52 524 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 ADOQ96SZ5 270 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 UBQLN3Q9H347 655 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 H2AFY2Q9P0M6 372 aaPredicted RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 DKK4Q9UBT3 224 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 MRTO4Q9UKD2 239 aaKnown RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 NPFFR2Q9Y5X5 522 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 ARGFXA6NJG6 315 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 ZNF891A8MT65 544 aaPredicted RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 RGS5O15539 181 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 ITGA10O75578 1167 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 CDRT1O95170 752 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 LYPD3O95274 346 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 CHAF1BQ13112 559 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 AIMP2Q13155 320 aaKnown RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLN8-208ENST00000635751 C22orf42Q6IC83 251 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 WDR88Q6ZMY6 472 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 RPS19BP1Q86WX3 136 aaKnown RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 TMEM203Q969S6 136 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 SLC25A46Q96AG3 418 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 KCTD7Q96MP8 289 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 OR52D1Q9H346 318 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 TRAPPC4Q9Y296 219 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 TMEM5Q9Y2B1 443 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 SF3B6Q9Y3B4 125 aaKnown RBP18.16■□□□□ 0.5
CLN8-208ENST00000635751 LAMA5O15230 3695 aa18.16■□□□□ 0.5
CLN8-208ENST00000635751 CPAMD8Q8IZJ3 1885 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 CNTRLQ7Z7A1 2325 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 TSPAN2O60636 221 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 PTNP21246 168 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 IL12BP29460 328 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 GABRA5P31644 462 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 PSMD4P55036 377 aaKnown RBP18.15■□□□□ 0.5
CLN8-208ENST00000635751 RPS25P62851 125 aaKnown RBP18.15■□□□□ 0.5
CLN8-208ENST00000635751 RPL13AP3Q6NVV1 102 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 H3F3CQ6NXT2 135 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 GID4Q8IVV7 300 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 CLEC1AQ8NC01 280 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 ZNF485Q8NCK3 441 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 PSD4Q8NDX1 1056 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 PFN4Q8NHR9 129 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 PSMF1Q92530 271 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 HS6ST2Q96MM7 605 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 WDFY2Q96P53 400 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 RASL10BQ96S79 203 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 ZNF559Q9BR84 538 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 MED18Q9BUE0 208 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 JAM3Q9BX67 310 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 IL20RAQ9UHF4 553 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 NCOR2Q9Y618 2525 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 DMXL2Q8TDJ6 3036 aa18.15■□□□□ 0.5
CLN8-208ENST00000635751 IGHA1P01876 353 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 IFI30P13284 250 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 ITGA3P26006 1051 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 PSPHP78330 225 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 B3GNTL1Q67FW5 361 aaPredicted RBP18.14■□□□□ 0.5
CLN8-208ENST00000635751 ZNF613Q6PF04 617 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 CXXC5Q7LFL8 322 aaKnown RBP18.14■□□□□ 0.5
CLN8-208ENST00000635751 LHFPL3Q86UP9 236 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 CDK20Q8IZL9 346 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 KLHL36Q8N4N3 616 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 BBS1Q8NFJ9 593 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 OR4F15Q8NGB8 312 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 SLC22A8Q8TCC7 542 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 HTRA1Q92743 480 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 C1GALT1C1Q96EU7 318 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 FN3KQ9H479 309 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 HINT3Q9NQE9 182 aaKnown RBP18.14■□□□□ 0.5
CLN8-208ENST00000635751 FLRT3Q9NZU0 649 aa18.14■□□□□ 0.5
CLN8-208ENST00000635751 SLC2A10O95528 541 aa18.14■□□□□ 0.49
CLN8-208ENST00000635751 GUSBP08236 651 aa18.14■□□□□ 0.49
CLN8-208ENST00000635751 MAKP20794 623 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms