RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SPANXN4Q5MJ08 99 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 MRPL2Q5T653 305 aaKnown RBP9.52□□□□□ -0.89
LINC00963-214ENST00000622680 RNF130Q86XS8 419 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 ZCCHC24Q8N2G6 241 aaKnown RBP9.52□□□□□ -0.89
LINC00963-214ENST00000622680 PNPT1Q8TCS8 783 aaKnown RBP9.52□□□□□ -0.89
LINC00963-214ENST00000622680 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 OIT3Q8WWZ8 545 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 NEURL3Q96EH8 262 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 DPY30Q9C005 99 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 NELFAQ9H3P2 528 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 ADPRHL2Q9NX46 363 aa9.52□□□□□ -0.89
LINC00963-214ENST00000622680 A0A096LPE4 126 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 PRSS51A0A1B0GVH4 220 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 AGAP5A6NIR3 686 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 AQP7P3A6NL99 342 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 ZNF587BE7ETH6 402 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 FRS3O43559 492 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 KRT33AO76009 404 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 CRYAAP02489 173 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 GPIP06744 558 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 GUSBP08236 651 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 RPS4Y1P22090 263 aaKnown RBP9.51□□□□□ -0.89
LINC00963-214ENST00000622680 SERPINB5P36952 375 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 CDKN2CP42773 168 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 SLC1A3P43003 542 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 NAAAQ02083 359 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 EPS8Q12929 822 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 CCNIQ14094 377 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 SQLEQ14534 574 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 CASP8Q14790 479 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 COX20Q5RI15 118 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 RINLQ6ZS11 566 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 HOMEZQ8IX15 550 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 SVOPLQ8N434 492 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.51□□□□□ -0.89
LINC00963-214ENST00000622680 ZNF781Q8N8C0 355 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 POMGNT2Q8NAT1 580 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 SNX18Q96RF0 628 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 KATNB1Q9BVA0 655 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 PLK3Q9H4B4 646 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 MYOZ1Q9NP98 299 aaPredicted RBP9.51□□□□□ -0.89
LINC00963-214ENST00000622680 RLIMQ9NVW2 624 aa9.51□□□□□ -0.89
LINC00963-214ENST00000622680 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00963-214ENST00000622680 V9GYY5 206 aaPredicted RBP9.51□□□□□ -0.89
LINC00963-214ENST00000622680 WDR91A4D1P6 747 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 CFAP73A6NFT4 308 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 B9A039 149 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 LYNX1G3V0Z9 82 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 hCG_2039718K7EN88 272 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TCF21O43680 179 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 LILRA1O75019 489 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 UPK3AO75631 287 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 STAMBPO95630 424 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 PGRP06401 933 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 LYNX1P0DP58 116 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 DAOP14920 347 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 CXCR1P25024 350 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 FKBP2P26885 142 aaKnown RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 APEX1P27695 318 aaKnown RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 PPOXP50336 477 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 IDH3GP51553 393 aaPredicted RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 P2RY4P51582 365 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 NME5P56597 212 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 UBE2NP61088 152 aaKnown RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TRIP10Q15642 601 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 EFNB3Q15768 340 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 FAM174BQ3ZCQ3 159 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 ANXA8L1Q5VT79 327 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 LIPNQ5VXI9 398 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 AP1ARQ63HQ0 302 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 NIPAL3Q6P499 406 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 ZNF836Q6ZNA1 936 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 CMIPQ8IY22 773 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 CADM2Q8N3J6 435 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 BCL2L2Q92843 193 aaPredicted RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 PMM1Q92871 262 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TESCQ96BS2 214 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TEX37Q96LM6 180 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TRNT1Q96Q11 434 aaKnown RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 SF3B5Q9BWJ5 86 aaKnown RBP9.5□□□□□ -0.89
LINC00963-214ENST00000622680 TMEM45AQ9NWC5 275 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
LINC00963-214ENST00000622680 ARPC4-TTLL3A0A0A6YYG9 625 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 SH3PXD2BA1X283 911 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 ZNF503-AS2A6NEH8 195 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 E9PBE3 544 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 FAAHO00519 579 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 SEC14L2O76054 403 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 PDE5AO76074 875 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 IGLV1-44P01699 117 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 GSNP06396 782 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 IGFBP1P08833 259 aaPredicted RBP9.49□□□□□ -0.89
LINC00963-214ENST00000622680 NUDT17P0C025 328 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 PRG2P13727 222 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 IL7RP16871 459 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 GIFP27352 417 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 THBS4P35443 961 aa9.49□□□□□ -0.89
LINC00963-214ENST00000622680 SRP14P37108 136 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms