RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 APOFQ13790 326 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 PLEKHN1Q494U1 663 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC6A19Q695T7 634 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF620Q6ZNG0 422 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 KIF18BQ86Y91 864 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 OR51A7Q8NH64 312 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 FANK1Q8TC84 345 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 ADNPQ9H2P0 1102 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 EGLN3Q9H6Z9 239 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 FKRPQ9H9S5 495 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 FAM118AQ9NWS6 357 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 TUBD1Q9UJT1 453 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 LHX6Q9UPM6 363 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 MT-ATP6P00846 226 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 TP53P04637 393 aaPredicted RBP16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 CHMP24386 653 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 EPHA2P29317 976 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 CAPGP40121 348 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC9A3P48764 834 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 CLK1P49759 484 aaKnown RBP16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 CRISP1P54107 249 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 GFRA1P56159 465 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 MYBPHQ13203 477 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 ZDHHC11Q9H8X9 412 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 ACKR4Q9NPB9 350 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 PNPLA3Q9NST1 481 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF229Q9UJW7 825 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 SIGLEC7Q9Y286 467 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 CDH10Q9Y6N8 788 aa16.04■□□□□ 0.16
PTCHD3-202ENST00000622555 A0A1W2PNR3 127 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 GJE1A6NN92 205 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 LINC01387J3KSC0 135 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 HCN1O60741 890 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 HIST1H2ABP04908 130 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TFAP2AP05549 437 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 IMPDH2P12268 514 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 POU3F2P20265 443 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 NUP107P57740 925 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 ADARB1P78563 741 aaKnown RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 C19orf57Q0VDD7 668 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 OR7A5Q15622 319 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 ZBED5Q49AG3 693 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 Q6ZPB1 254 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 USP51Q70EK9 711 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 HIST3H2AQ7L7L0 130 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 MAMDC2Q7Z304 686 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 OR6S1Q8NH40 331 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 MFSD8Q8NHS3 518 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TEX47Q8TBZ9 253 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 LIPHQ8WWY8 451 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 HIST1H2ACQ93077 130 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TNFRSF13CQ96RJ3 184 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TAPBPLQ9BX59 468 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 MRPS26Q9BYN8 205 aaKnown RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 PLA2G12AQ9BZM1 189 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 GRIP2Q9C0E4 1043 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TSPAN10Q9H1Z9 355 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 LDAHQ9H6V9 325 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 EXO5Q9H790 373 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 TBC1D23Q9NUY8 699 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 LUZP4Q9P127 313 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 HDGFL3Q9Y3E1 203 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 LIPGQ9Y5X9 500 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 PIEZO2Q9H5I5 2752 aa16.03■□□□□ 0.16
PTCHD3-202ENST00000622555 H0YAE9 185 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 RCBTB2O95199 551 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 ASAH2BP0C7U1 165 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 STARP49675 285 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 INAQ16352 499 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 NADK2Q4G0N4 442 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 GXYLT1Q4G148 440 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 TTC23Q5W5X9 447 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 RPUSD3Q6P087 351 aaKnown RBP16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 C19orf48Q6RUI8 117 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 NANOGNBQ7Z5D8 188 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 OSTF1Q92882 214 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 KLHL15Q96M94 604 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 TAAR6Q96RI8 345 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 ASPNQ9BXN1 380 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 OR52D1Q9H346 318 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 MCCC2Q9HCC0 563 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 KIAA1549Q9HCM3 1950 aa16.02■□□□□ 0.16
PTCHD3-202ENST00000622555 TRGV5A0A0B4J1U4 118 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 LOC100130705A0A1B0GUX0 176 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 TRIM64A6NGJ6 449 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 LIPT2A6NK58 231 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 FTCDNL1E5RQL4 147 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 BCKDKO14874 412 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 SEC14L5O43304 696 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 PTP4A3O75365 173 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 GRPRP30550 384 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 OR2B6P58173 313 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 MFSD13AQ14CX5 517 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 PTGES3Q15185 160 aaKnown RBP16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 RPL13AP3Q6NVV1 102 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 SMARCD3Q6STE5 483 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 TRILQ7L0X0 811 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 UBQLNLQ8IYU4 475 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 CLDN22Q8N7P3 220 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms