RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CADM2Q8N3J6 435 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 PIGXQ8TBF5 258 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 TMEM204Q9BSN7 226 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 EMC3Q9P0I2 261 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 NOSIPQ9Y314 301 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 IFT52Q9Y366 437 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 USF3Q68DE3 2245 aa15.88■□□□□ 0.13
SCAMP4-213ENST00000621748 TRBV5-3A0A0A0MS03 114 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PGM3O95394 542 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 STAMBPO95630 424 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 IGHV3-9P01782 118 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 GPX2P18283 190 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 IGHV1-2P23083 117 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 MAP2K6P52564 334 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 SLC16A1P53985 500 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 NR1H2P55055 460 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 SLC35A1P78382 337 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 NKX6-1P78426 367 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 ZSWIM7Q19AV6 140 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 DNAL1Q4LDG9 190 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 ZNF311Q5JNZ3 666 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PRAMEF8Q5VWM4 474 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PRAMEF7Q5VXH5 474 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 WBP2NLQ6ICG8 309 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 SERPINA11Q86U17 422 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 KRT73Q86Y46 540 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PGAM4Q8N0Y7 254 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 HSD17B8Q92506 261 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PIGTQ969N2 578 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 PIP5K1AQ99755 562 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 IKZF5Q9H5V7 419 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 DLL4Q9NR61 685 aa15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-213ENST00000621748 GPR171O14626 319 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 FRS3O43559 492 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 CNOT4O95628 575 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 COX5AP20674 150 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 CXCR1P25024 350 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 SLC7A2P52569 658 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 COPZ1P61923 177 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 HOXC5Q00444 222 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 RBBP4Q09028 425 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 BNIP2Q12982 314 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 INTS11Q5TA45 600 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 ERICH5Q6P6B1 374 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 SEZ6L2Q6UXD5 910 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 C20orf204Q6ZNR8 217 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 ATG4DQ86TL0 474 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 DEFB107AQ8IZN7 70 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 C11orf65Q8NCR3 313 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 OR10A6Q8NH74 314 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 NFKBIDQ8NI38 313 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 BBS10Q8TAM1 723 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 CCL19Q99731 98 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 SPATA5L1Q9BVQ7 753 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 POTEKPQ9BYX7 375 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 PIF1Q9H611 641 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 PRDM4Q9UKN5 801 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 ANGPT4Q9Y264 503 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 GMEB1Q9Y692 573 aa15.86■□□□□ 0.13
SCAMP4-213ENST00000621748 EIF1BO60739 113 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 SMPD2O60906 423 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 ARAFP10398 606 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 SLC25A3Q00325 362 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 CEACAM7Q14002 265 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 RABL3Q5HYI8 236 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 SAMD4BQ5PRF9 694 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 PAQR6Q6TCH4 344 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 UBE2J2Q8N2K1 259 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 ZNF433Q8N7K0 673 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 IGFBPL1Q8WX77 278 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 APH1AQ96BI3 265 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 C3orf49Q96BT1 292 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 ZNF607Q96SK3 696 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 KCTD14Q9BQ13 255 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 USB1Q9BQ65 265 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 NAA11Q9BSU3 229 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 ARMC7Q9H6L4 198 aa15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 KAT8Q9H7Z6 458 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-213ENST00000621748 LIPT2A6NK58 231 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 MRPL33O75394 65 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 AKR7A3O95154 331 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 ETS2P15036 469 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 IDUAP35475 653 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 FOXG1P55316 489 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 CDK6Q00534 326 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 LIPEQ05469 1076 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 BNIP1Q12981 228 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 SCARB2Q14108 478 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 SLC17A1Q14916 467 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 OR7A5Q15622 319 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 STK11Q15831 433 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 NCMAPQ5T1S8 102 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 REEP3Q6NUK4 255 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 COMTD1Q86VU5 262 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 ARHGAP24Q8N264 748 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 TMEM99Q8N816 258 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 OR2T12Q8NG77 320 aa15.84■□□□□ 0.13
SCAMP4-213ENST00000621748 LILRB1Q8NHL6 650 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms