RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
FOXN3-219ENST00000615335 ACTR6Q9GZN1 396 aa12.05□□□□□ -0.48
FOXN3-219ENST00000615335 ABCG5Q9H222 651 aa12.05□□□□□ -0.48
FOXN3-219ENST00000615335 PARD6AQ9NPB6 346 aa12.05□□□□□ -0.48
FOXN3-219ENST00000615335 SEC14L3Q9UDX4 400 aa12.05□□□□□ -0.48
FOXN3-219ENST00000615335 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 TLCD2A6NGC4 264 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 NDUFS4O43181 175 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 RP2O75695 350 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 SOX14O95416 240 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 AHRP35869 848 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 FEN1P39748 380 aaKnown RBP12.04□□□□□ -0.48
FOXN3-219ENST00000615335 CFHR1Q03591 330 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 DOC2BQ14184 412 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 NTRK2Q16620 822 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 TCTE1Q5JU00 501 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 C22orf42Q6IC83 251 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 MFSD9Q8NBP5 474 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 GTF3AQ92664 365 aaKnown RBP12.04□□□□□ -0.48
FOXN3-219ENST00000615335 RFT1Q96AA3 541 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 ZFYVE21Q9BQ24 234 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 MACROD1Q9BQ69 325 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 NUDT22Q9BRQ3 303 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 SOHLH2Q9NX45 425 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 DNAJC27Q9NZQ0 273 aa12.04□□□□□ -0.48
FOXN3-219ENST00000615335 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
FOXN3-219ENST00000615335 C4orf47A7E2U8 309 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 FAAHO00519 579 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 PLPP1O14494 284 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SSNA1O43805 119 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 OR10H3O60404 316 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 LRP3O75074 770 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 H1F0P07305 194 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CD59P13987 128 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 ELAVL4P26378 380 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CSF2RBP32927 897 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SMSP52788 366 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CCL7P80098 99 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SEC23BQ15437 767 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 RNF212Q495C1 297 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SPDYE7PQ495Y7 208 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 WDR74Q6RFH5 385 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CASP12Q6UXS9 341 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 NANOGP1Q8N7R0 232 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 OR1S1Q8NH92 325 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 RAB8BQ92930 207 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 OR2A5Q96R48 311 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CD180Q99467 661 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TMPRSS13Q9BYE2 586 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 FAM60AQ9NP50 221 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 PILRAQ9UKJ1 303 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 A0A1W2PQM1 296 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 H3BN98 237 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 CLEC3AO75596 197 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 IGFBP1P08833 259 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 XKP51811 444 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 MADCAM1Q13477 382 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SNTB1Q13884 538 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TMEM201Q5SNT2 666 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TCTN3Q6NUS6 607 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 DEF8Q6ZN54 512 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TM4SF18Q96CE8 201 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TCTN2Q96GX1 697 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 TEFMQ96QE5 360 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 F2RL3Q96RI0 385 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 LRRN3Q9H3W5 708 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 SYNPO2LQ9H987 977 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 NDOR1Q9UHB4 597 aa12.03□□□□□ -0.48
FOXN3-219ENST00000615335 RPL36Q9Y3U8 105 aaKnown RBP12.03□□□□□ -0.48
FOXN3-219ENST00000615335 LOC105369274A0A096LPK9 316 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 G3V3Q6 166 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 RTCAO00442 366 aaKnown RBP12.02□□□□□ -0.48
FOXN3-219ENST00000615335 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.48
FOXN3-219ENST00000615335 TCRBP04435 133 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 CPEP16870 476 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 ARL4DP49703 201 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 P2RY4P51582 365 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 HSPB3Q12988 150 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 LIPKQ5VXJ0 399 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 C6orf120Q7Z4R8 191 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 OR4N4Q8N0Y3 316 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 ELMOD3Q96FG2 381 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 TMEM41AQ96HV5 264 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 POLR2J3Q9H1A7 115 aaKnown RBP12.02□□□□□ -0.48
FOXN3-219ENST00000615335 CDCP1Q9H5V8 836 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 NEUROD4Q9HD90 331 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 CLEC2DQ9UHP7 191 aa12.02□□□□□ -0.48
FOXN3-219ENST00000615335 CLCA2Q9UQC9 943 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms