RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TAMM41Q96BW9 452 aa12.8□□□□□ -0.36
HDDC2-204ENST00000608295 ZNF385AQ96PM9 386 aaKnown RBP12.8□□□□□ -0.36
HDDC2-204ENST00000608295 ZNF317Q96PQ6 595 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-204ENST00000608295 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
HDDC2-204ENST00000608295 NANOGQ9H9S0 305 aa12.8□□□□□ -0.36
HDDC2-204ENST00000608295 TESQ9UGI8 421 aaKnown RBP12.8□□□□□ -0.36
HDDC2-204ENST00000608295 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-204ENST00000608295 DSCAMO60469 2012 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 TEP1Q99973 2627 aaKnown RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 IGKV1D-42A0A075B6H8 117 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 AQP7P3A6NL99 342 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 LRRN3E7EW58 273 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 KPNA4O00629 521 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 GPR171O14626 319 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 KLF4O43474 513 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 DNPH1O43598 174 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 EIF1BO60739 113 aaKnown RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 PNMTP11086 282 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 PPP3CBP16298 524 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 EGR4Q05215 589 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 CYLC2Q14093 348 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 TESK1Q15569 626 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 DUSP7Q16829 419 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ZSWIM7Q19AV6 140 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 VMACQ2NL98 169 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 LRRC23Q53EV4 343 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 BEX5Q5H9J7 111 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 AAED1Q7RTV5 226 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 RANBP3LQ86VV4 465 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 C10orf53Q8N6V4 93 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 OR9K2Q8NGE7 335 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 OR4D11Q8NGI4 311 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 MCHR1Q99705 422 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ECSITQ9BQ95 431 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 UPB1Q9UBR1 384 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 TRAPPC4Q9Y296 219 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 GMEB1Q9Y692 573 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 ROS1P08922 2347 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 CELSR1Q9NYQ6 3014 aa12.79□□□□□ -0.36
HDDC2-204ENST00000608295 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 M0R082 166 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 AIM2O14862 343 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TPST2O60704 377 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 SERPINI2O75830 405 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 COX5AP20674 150 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 FKBP2P26885 142 aaKnown RBP12.78□□□□□ -0.36
HDDC2-204ENST00000608295 SLC16A1P53985 500 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 CDH12P55289 794 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 H3F3AP84243 136 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 RBBP4Q09028 425 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 NPTX1Q15818 432 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 FBXW9Q5XUX1 488 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 ADAM5Q6NVV9 412 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 SPATA21Q7Z572 469 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 OR6T1Q8NGN1 323 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 NEUROG1Q92886 237 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
HDDC2-204ENST00000608295 CCL19Q99731 98 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TRIM2Q9C040 744 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 SLC7A10Q9NS82 523 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 ASB6Q9NWX5 421 aa12.78□□□□□ -0.36
HDDC2-204ENST00000608295 MED13LQ71F56 2210 aa12.77□□□□□ -0.36
HDDC2-204ENST00000608295 NPIPB7O75200 414 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 KRT33AO76009 404 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 GOSR1O95249 250 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 ITGA5P08648 1049 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 CD53P19397 219 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 GGT1P19440 569 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 CD247P20963 164 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 GRPRP30550 384 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 PCYT1AP49585 367 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 SELENOPP49908 381 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 GZMMP51124 257 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 P2RY4P51582 365 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 CRYBA2P53672 197 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 P2RY6Q15077 328 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 PDK3Q15120 406 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 DEFB113Q30KQ7 82 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 DEF8Q6ZN54 512 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF433Q8N7K0 673 aaPredicted RBP12.77□□□□□ -0.37
HDDC2-204ENST00000608295 PCYOX1LQ8NBM8 494 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 KBTBD8Q8NFY9 601 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms