RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 MAOAP21397 527 aa19.01■□□□□ 0.63
UPF1-207ENST00000599848 CRHBPP24387 322 aa19.01■□□□□ 0.63
UPF1-207ENST00000599848 B3GNT9Q6UX72 402 aa19.01■□□□□ 0.63
UPF1-207ENST00000599848 CLEC14AQ86T13 490 aa19.01■□□□□ 0.63
UPF1-207ENST00000599848 HRASLSQ9HDD0 168 aa19.01■□□□□ 0.63
UPF1-207ENST00000599848 CNOT2Q9NZN8 540 aaKnown RBP19.01■□□□□ 0.63
UPF1-207ENST00000599848 ZNF346Q9UL40 294 aaKnown RBP19.01■□□□□ 0.63
UPF1-207ENST00000599848 K7EQM0 130 aa19■□□□□ 0.63
UPF1-207ENST00000599848 BMI1P35226 326 aa19■□□□□ 0.63
UPF1-207ENST00000599848 LUMP51884 338 aaPredicted RBP19■□□□□ 0.63
UPF1-207ENST00000599848 MRPL2Q5T653 305 aaKnown RBP19■□□□□ 0.63
UPF1-207ENST00000599848 LGALS12Q96DT0 336 aa19■□□□□ 0.63
UPF1-207ENST00000599848 STACQ99469 402 aa19■□□□□ 0.63
UPF1-207ENST00000599848 SLC30A3Q99726 388 aa19■□□□□ 0.63
UPF1-207ENST00000599848 BEX2Q9BXY8 128 aa19■□□□□ 0.63
UPF1-207ENST00000599848 BEX1Q9HBH7 125 aa19■□□□□ 0.63
UPF1-207ENST00000599848 FBXO4Q9UKT5 387 aa19■□□□□ 0.63
UPF1-207ENST00000599848 PRAMEF27A3QJZ7 478 aa19■□□□□ 0.63
UPF1-207ENST00000599848 ITGBL1O95965 494 aaPredicted RBP19■□□□□ 0.63
UPF1-207ENST00000599848 ARAFP10398 606 aa19■□□□□ 0.63
UPF1-207ENST00000599848 KLHDC8BQ8IXV7 354 aa19■□□□□ 0.63
UPF1-207ENST00000599848 RBMXL3Q8N7X1 1067 aaKnown RBP19■□□□□ 0.63
UPF1-207ENST00000599848 KCNG3Q8TAE7 436 aa19■□□□□ 0.63
UPF1-207ENST00000599848 TRAV17A0A0B4J275 112 aa19■□□□□ 0.63
UPF1-207ENST00000599848 TSPAN4O14817 238 aa19■□□□□ 0.63
UPF1-207ENST00000599848 C9orf152Q5JTZ5 239 aa19■□□□□ 0.63
UPF1-207ENST00000599848 NANPQ8TBE9 248 aa19■□□□□ 0.63
UPF1-207ENST00000599848 H0YIG0 161 aa19■□□□□ 0.63
UPF1-207ENST00000599848 OR7C1O76099 320 aaPredicted RBP19■□□□□ 0.63
UPF1-207ENST00000599848 SERPINA2P20848 420 aa19■□□□□ 0.63
UPF1-207ENST00000599848 ERV3-1Q14264 604 aa19■□□□□ 0.63
UPF1-207ENST00000599848 CCDC58Q4VC31 144 aa19■□□□□ 0.63
UPF1-207ENST00000599848 CTSL3PQ5NE16 218 aa19■□□□□ 0.63
UPF1-207ENST00000599848 CFAP77Q6ZQR2 320 aa19■□□□□ 0.63
UPF1-207ENST00000599848 CMTM4Q8IZR5 234 aa19■□□□□ 0.63
UPF1-207ENST00000599848 CHDHQ8NE62 594 aaPredicted RBP19■□□□□ 0.63
UPF1-207ENST00000599848 OR51L1Q8NGJ5 315 aa19■□□□□ 0.63
UPF1-207ENST00000599848 TMEM163Q8TC26 289 aa19■□□□□ 0.63
UPF1-207ENST00000599848 ZNF649Q9BS31 505 aa19■□□□□ 0.63
UPF1-207ENST00000599848 ARL6Q9H0F7 186 aa19■□□□□ 0.63
UPF1-207ENST00000599848 POLDIP2Q9Y2S7 368 aa19■□□□□ 0.63
UPF1-207ENST00000599848 LSM5Q9Y4Y9 91 aaKnown RBP19■□□□□ 0.63
UPF1-207ENST00000599848 KDM4EB2RXH2 506 aaPredicted RBP18.99■□□□□ 0.63
UPF1-207ENST00000599848 TBPP20226 339 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 INPP5KQ9BT40 448 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 RASD1Q9Y272 281 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 GPR52Q9Y2T5 361 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 PRSS56P0CW18 603 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 PSMB5P28074 263 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 HOXA1P49639 335 aaPredicted RBP18.99■□□□□ 0.63
UPF1-207ENST00000599848 HTD2P86397 168 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 TSPAN31Q12999 210 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 MS4A8Q9BY19 250 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 SAP130Q9H0E3 1048 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 SMIM30A4D0T7 59 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 FAM171A2A8MVW0 826 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 F6UZH7 168 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 GAPDHSO14556 408 aaPredicted RBP18.99■□□□□ 0.63
UPF1-207ENST00000599848 ECI1P42126 302 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 TAS2R19P59542 299 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 CEACAM7Q14002 265 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 TSSK4Q6SA08 328 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 MED25Q71SY5 747 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 PRICKLE2Q7Z3G6 844 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 TBX21Q9UL17 535 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 HMX3A6NHT5 357 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 TSPAN15O95858 294 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 MGAT3Q09327 533 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.99■□□□□ 0.63
UPF1-207ENST00000599848 NKAIN2Q5VXU1 208 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 AFMIDQ63HM1 303 aa18.99■□□□□ 0.63
UPF1-207ENST00000599848 GOLGA4Q13439 2230 aaKnown RBP18.99■□□□□ 0.63
UPF1-207ENST00000599848 A0A1W2PPC4 97 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 SLC5A10A0PJK1 596 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 AADACL3Q5VUY0 350 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 OR5M10Q6IEU7 315 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 MEX3BQ6ZN04 569 aaKnown RBP18.98■□□□□ 0.63
UPF1-207ENST00000599848 SLC37A2Q8TED4 501 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 ATF6BQ99941 703 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 MYOM1P52179 1685 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 A0A087WZY1 265 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 STMND1H3BQB6 276 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 GABREP78334 506 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 BLOC1S1P78537 153 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 GFRALQ6UXV0 394 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 LRRC18Q8N456 261 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 NETO1Q8TDF5 533 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 FAM210AQ96ND0 272 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 DCAF13Q9NV06 445 aaKnown RBP18.98■□□□□ 0.63
UPF1-207ENST00000599848 PTGDR2Q9Y5Y4 395 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 ACTL7AQ9Y615 435 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 TVP23AA6NH52 213 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 PPIAP62937 165 aaKnown RBP18.98■□□□□ 0.63
UPF1-207ENST00000599848 TMEM151AQ8N4L1 468 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 L3MBTL4Q8NA19 623 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 DSCR3O14972 297 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 ELK4P28324 431 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 CD1CP29017 333 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 PRKAR1BP31321 381 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 DPTQ07507 201 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms