RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TMEM99Q8N816 258 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 LSMEM1Q8N8F7 131 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 LZICQ8WZA0 190 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 KISS1RQ969F8 398 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-227ENST00000591849 APH1AQ96BI3 265 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 C12orf10Q9HB07 376 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 RASSF1Q9NS23 344 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 UPB1Q9UBR1 384 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 ARL2BPQ9Y2Y0 163 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 SH3GLB1Q9Y371 365 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 PDZD2O15018 2839 aa8.95□□□□□ -0.98
BRCA1-227ENST00000591849 TRAV36DV7A0A075B6V5 113 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 CPSF4LA6NMK7 179 aaKnown RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 FXYD1O00168 92 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 FMO6PO60774 539 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 GOSR1O95249 250 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 IGHV3-9P01782 118 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 CBLP22681 906 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 HTR2AP28223 471 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 SLC7A2P52569 658 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 MXRA7P84157 204 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ITGADQ13349 1161 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 C1DQ13901 141 aaKnown RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 MFSD13AQ14CX5 517 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 P2RY6Q15077 328 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 STAC2Q6ZMT1 411 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 AAED1Q7RTV5 226 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 CDH24Q86UP0 819 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 TREML1Q86YW5 311 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 P3H2Q8IVL5 708 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 MFSD8Q8NHS3 518 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 TAMM41Q96BW9 452 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 KTI12Q96EK9 354 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 PIK3IP1Q96FE7 263 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 TPD52L3Q96J77 140 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF583Q96ND8 569 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 LRRC37BQ96QE4 947 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ARHGDIGQ99819 225 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 SF3B5Q9BWJ5 86 aaKnown RBP8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ASPNQ9BXN1 380 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ACTR6Q9GZN1 396 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 NGBQ9NPG2 151 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 CMTM6Q9NX76 183 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 ADA2Q9NZK5 511 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 PRSS50Q9UI38 385 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 TESMINQ9Y4I5 508 aa8.94□□□□□ -0.98
BRCA1-227ENST00000591849 IGKV3D-15A0A087WSY6 115 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TRAPPC13A5PLN9 417 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 AQP7P3A6NL99 342 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF716A6NP11 495 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 RAMP1O60894 148 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 GCM2O75603 506 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 VAMP5O95183 116 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 NQO1P15559 274 aaKnown RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 PSMB1P20618 241 aaKnown RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 KDELR2P33947 212 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 CDH12P55289 794 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TAS2R41P59536 307 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 PSME3P61289 254 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 H3F3AP84243 136 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TSC22D1Q15714 1073 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 STK11Q15831 433 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 NRF1Q16656 503 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 CYBRD1Q53TN4 286 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 ENTPD8Q5MY95 495 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 SFRP5Q5T4F7 317 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 FAM69AQ5T7M9 428 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 FBXW9Q5XUX1 488 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 ZNF613Q6PF04 617 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TTC33Q6PID6 262 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 C6orf89Q6UWU4 347 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 HACD2Q6Y1H2 254 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 DEF8Q6ZN54 512 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 Q6ZT83 130 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 BHLHA15Q7RTS1 189 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 COMTD1Q86VU5 262 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 CARM1Q86X55 608 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 CDC20BQ86Y33 519 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 SLC15A3Q8IY34 581 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 GPR32P1Q8NGA4 272 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 OR9K2Q8NGE7 335 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 OR6T1Q8NGN1 323 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 TAAR8Q969N4 342 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 FAM162AQ96A26 154 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 MUCL1Q96DR8 90 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 MYLK2Q9H1R3 596 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 OR10A4Q9H209 315 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 ASB6Q9NWX5 421 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 ING1Q9UK53 422 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-227ENST00000591849 USP22Q9UPT9 525 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 RASD1Q9Y272 281 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 HEATR5AQ86XA9 2040 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 MED12LQ86YW9 2145 aa8.93□□□□□ -0.98
BRCA1-227ENST00000591849 HCFC1P51610 2035 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms