RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	WDR70	Q9NW82	654 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	RBFOX1	Q9NWB1	397 aa	Known RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ING4	Q9UNL4	249 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF670-ZNF695	F2Z2N8	137 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318		M0R129	80 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	NDUFA2	O43678	99 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PIP5K1C	O60331	668 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	CSF3	P09919	207 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PRKAR1A	P10644	381 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PIP	P12273	146 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ETV5	P41161	510 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	KIR2DL3	P43628	341 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	IDH2	P48735	452 aa	Known RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	NR0B1	P51843	470 aa	Known RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	INSM1	Q01101	510 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	SPEM2	Q0P670	501 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ST3GAL4	Q11206	333 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	RIN1	Q13671	783 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	GALE	Q14376	348 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZSWIM7	Q19AV6	140 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	COL28A1	Q2UY09	1125 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	FAM69B	Q5VUD6	431 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF613	Q6PF04	617 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	METAP1D	Q6UB28	335 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	MBOAT2	Q6ZWT7	520 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PRR22	Q8IZ63	422 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	GHDC	Q8N2G8	530 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	CLDN22	Q8N7P3	220 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	B3GNT7	Q8NFL0	401 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	OIT3	Q8WWZ8	545 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF559	Q9BR84	538 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	HDHD5	Q9BXW7	423 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	RANBP3	Q9H6Z4	567 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	WDR54	Q9H977	334 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	UBQLN4	Q9NRR5	601 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC39A1	Q9NY26	324 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	CNIH4	Q9P003	139 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318		A0A0B4J293	547 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318		A0A0B4J2E0	115 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318		A0A1B0GX12	115 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318		I3L521	148 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	TSPAN2	O60636	221 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	UTS2	O95399	124 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	SCG5	P05408	212 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	STS	P08842	583 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	IFI30	P13284	250 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	HOXB1	P14653	301 aa	Predicted RBP	14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	PSMA1	P25786	263 aa	Known RBP	14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	POU1F1	P28069	291 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	ADH7	P40394	386 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	CLDN6	P56747	220 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	CLDN20	P56880	219 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	TSPAN31	Q12999	210 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	CD226	Q15762	336 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	BICRAL	Q6AI39	1079 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	TEX261	Q6UWH6	196 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC29A4	Q7RTT9	530 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	ADGRG3	Q86Y34	549 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	NRM	Q8IXM6	262 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	C9orf62	Q8N4C0	152 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	C17orf47	Q8NEP4	570 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	OR4M2	Q8NGB6	313 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	GNPDA2	Q8TDQ7	276 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	FAM46A	Q96IP4	442 aa	Known RBP	14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	CMKLR1	Q99788	373 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	CRB3	Q9BUF7	120 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	ULBP3	Q9BZM4	244 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	TMEM9B	Q9NQ34	198 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	GLS2	Q9UI32	602 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	PCDHGB7	Q9Y5F8	929 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	B3GALT1	Q9Y5Z6	326 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318	ALG5	Q9Y673	324 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318		U3KQ87	197 aa		14.08	□□□□□ -0.16
DDX39A-209	ENST00000589318		A0A1B0GWA3	101 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	FABP12	A6NFH5	140 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PRR33	A8MZF0	331 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	ATP6V1G2-DDX39B	F2Z307	99 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CSTA	P01040	98 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	IL1A	P01583	271 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CYC1	P08574	325 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	HSMCR30	P0CW71	290 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PTN	P21246	168 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	RNF4	P78317	190 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	TST	Q16762	297 aa	Known RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	SOWAHC	Q53LP3	525 aa	Predicted RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CLLU1	Q5K131	121 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	CDCP2	Q5VXM1	449 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	C12orf73	Q69YU5	71 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PAPD4	Q6PIY7	484 aa	Known RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	OR9Q1	Q8NGQ5	310 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	LILRB1	Q8NHL6	650 aa	Predicted RBP	14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PIGX	Q8TBF5	258 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	METTL21A	Q8WXB1	218 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	AP3S1	Q92572	193 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	ADO	Q96SZ5	270 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	BEX2	Q9BXY8	128 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PLA2G12A	Q9BZM1	189 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	SLC23A1	Q9UHI7	598 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318	PMS2P1	A4D2B8	440 aa		14.07	□□□□□ -0.16
DDX39A-209	ENST00000589318		H3BN98	237 aa		14.07	□□□□□ -0.16

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