RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CDKN2CP42773 168 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 SLC7A2P52569 658 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 PHC1P78364 1004 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 RASGEF1BQ0VAM2 473 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 PDE7AQ13946 482 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 MLC1Q15049 377 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 CD226Q15762 336 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 PRSS53Q2L4Q9 553 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 SPDYE7PQ495Y7 208 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 HACD2Q6Y1H2 254 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 MSANTD1Q6ZTZ1 278 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 SZRD1Q7Z422 152 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 OR8J2Q8NGG1 315 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 FBXO30Q8TB52 745 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.5□□□□□ -1.21
SDF2-204ENST00000587338 ZFP90Q8TF47 636 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 ZFAND2BQ8WV99 257 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 GTF2H4Q92759 462 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 ELP4Q96EB1 424 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 VRK1Q99986 396 aaPredicted RBP7.5□□□□□ -1.21
SDF2-204ENST00000587338 THUMPD3Q9BV44 507 aaKnown RBP7.5□□□□□ -1.21
SDF2-204ENST00000587338 GLIPR2Q9H4G4 154 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 PIF1Q9H611 641 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 METTL17Q9H7H0 456 aaPredicted RBP7.5□□□□□ -1.21
SDF2-204ENST00000587338 FKRPQ9H9S5 495 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 SPAG4Q9NPE6 437 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 NTMQ9P121 344 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 ING1Q9UK53 422 aaPredicted RBP7.5□□□□□ -1.21
SDF2-204ENST00000587338 PRPF19Q9UMS4 504 aaKnown RBP7.5□□□□□ -1.21
SDF2-204ENST00000587338 SLC25A15Q9Y619 301 aa7.5□□□□□ -1.21
SDF2-204ENST00000587338 A0A096LPI6 279 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NPIPA5A0A0B4J1W7 369 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 A0A1W2PNR3 127 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NPIPA7E9PJI5 369 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 ATP6V1G2-DDX39BF2Z307 99 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 RNASET2O00584 256 aaKnown RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 EFNA2O43921 213 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 STAMBPO95630 424 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NPPAP01160 153 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NPIPA8P0DM63 369 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 IL2RGP31785 369 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 MSX2P35548 267 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 CHI3L1P36222 383 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 COMPP49747 757 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 MTPNP58546 118 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 SNRPD2P62316 118 aaKnown RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 ZNF117Q03924 483 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 LRRC74AQ0VAA2 488 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 HSPB3Q12988 150 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 GTDC1Q4AE62 458 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NANOGP8Q6NSW7 305 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 SLC46A3Q7Z3Q1 461 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 GALNT5Q7Z7M9 940 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 ZAR1Q86SH2 424 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 MISPQ8IVT2 679 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 CLEC4FQ8N1N0 589 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 DPP10Q8N608 796 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 NATD1Q8N6N6 113 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 LINC01356Q8N9X3 169 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 ZNF540Q8NDQ6 660 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 TOR1AIP2Q8NFQ8 470 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 ZFP28Q8NHY6 868 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 OR5P2Q8WZ92 322 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 CCDC124Q96CT7 223 aaKnown RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 AMDHD1Q96NU7 426 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 CGREF1Q99674 301 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 SH3GL1Q99961 368 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 PAIP1Q9H074 479 aaKnown RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 MMADHCQ9H3L0 296 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 NANOGQ9H9S0 305 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 MYOZ1Q9NP98 299 aaPredicted RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 VAPAQ9P0L0 249 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 BTNL2Q9UIR0 455 aa7.49□□□□□ -1.21
SDF2-204ENST00000587338 HEATR1Q9H583 2144 aaKnown RBP7.49□□□□□ -1.21
SDF2-204ENST00000587338 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 EVPLLA8MZ36 301 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 FAM157AC9JC47 383 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 OIP5O43482 229 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 CYTIPO60759 359 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 TBX19O60806 448 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 NKX2-2O95096 273 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 SLC6A2P23975 617 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 CHN2P52757 468 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 PRKAG1P54619 331 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 RAC3P60763 192 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 HBA1P69905 142 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 DEFA6Q01524 100 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 SELENBP1Q13228 472 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 SELPLGQ14242 412 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 SWI5Q1ZZU3 235 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 RUNDC3AQ59EK9 446 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 RABL3Q5HYI8 236 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 SAMD4BQ5PRF9 694 aaKnown RBP7.48□□□□□ -1.21
SDF2-204ENST00000587338 CCNJQ5T5M9 372 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 C1orf146Q5VVC0 180 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 FBXW9Q5XUX1 488 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 DLEU7Q6UYE1 221 aa7.48□□□□□ -1.21
SDF2-204ENST00000587338 ZNF551Q7Z340 670 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms