RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 YARS2Q9Y2Z4 477 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 NCKAP5O14513 1909 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 FBN3Q75N90 2809 aa7.09□□□□□ -1.28
VMP1-204ENST00000587259 KIAA1549Q9HCM3 1950 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 FN1P02751 2386 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 TRAPPC13A5PLN9 417 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 PRAMEF25A6NGN4 478 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 FRG2CA6NGY1 282 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 KIAA1324LA8MWY0 1029 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 J3KTA2 159 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZNF701M0R085 212 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 M0R3G1 203 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ACOT7O00154 380 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 HRKO00198 91 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 SLC1A7O00341 560 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 FFAR1O14842 300 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 CYP7B1O75881 506 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZFAND5O76080 213 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ATP6V1B1P15313 513 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 HPGDP15428 266 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 S1PR1P21453 382 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 CNR1P21554 472 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 DRD5P21918 477 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 BMP5P22003 454 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 CRHBPP24387 322 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 DNASE1P24855 282 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 RBM34P42696 430 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 PPICP45877 212 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 YAP1P46937 504 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 ATP12AP54707 1039 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ISL1P61371 349 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 RPP38P78345 283 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 PPP1R8Q12972 351 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 MAD2L1BPQ15013 274 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 POU4F3Q15319 338 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZNF141Q15928 474 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ENTPD8Q5MY95 495 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 MRPL2Q5T653 305 aaKnown RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 C1orf185Q5T7R7 199 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZNF770Q6IQ21 691 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 C1orf94Q6P1W5 598 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 CASP12Q6UXS9 341 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZNF730Q6ZMV8 503 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 DGAT2L6Q6ZPD8 337 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 SLC22A16Q86VW1 577 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 VRK2Q86Y07 508 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 FAM109AQ8N4B1 249 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ZNF615Q8N8J6 731 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 OR9Q2Q8NGE9 314 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 LINC01560Q8TB33 94 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 FAM81AQ8TBF8 368 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 GNPDA2Q8TDQ7 276 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 PTPMT1Q8WUK0 201 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 FCGR1BQ92637 280 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 DIO2Q92813 273 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 HSPBAP1Q96EW2 488 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 MPP4Q96JB8 637 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 JSRP1Q96MG2 331 aaPredicted RBP7.08□□□□□ -1.28
VMP1-204ENST00000587259 HS6ST2Q96MM7 605 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 MCHR1Q99705 422 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 MDFIQ99750 246 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 TRIM2Q9C040 744 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 LDAHQ9H6V9 325 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 ANKRA2Q9H9E1 313 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 TMEM27Q9HBJ8 222 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 MYOTQ9UBF9 498 aa7.08□□□□□ -1.28
VMP1-204ENST00000587259 TRGV5A0A0B4J1U4 118 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 TRBV4-1A0A0J9YWV2 114 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 C2orf92A0A1B0GVN3 265 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 A0A1W2PPR1 153 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 IRGMA1A4Y4 181 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FAM221AA4D161 298 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FIGNL2A6NMB9 653 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 A6NNC1 897 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 ZAR1LA6NP61 321 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 E9PQ18 207 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SCDO00767 359 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CHP2O43745 196 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FCMRO60667 390 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CLIC3O95833 236 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 IGHG3P01860 377 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 IGKV3-11P04433 115 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 TFAP2AP05549 437 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CYP4B1P13584 511 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FPR3P25089 353 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SSTR4P31391 388 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SOX18P35713 384 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC6A8P48029 635 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CLK3P49761 638 aaKnown RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 CRISP1P54107 249 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 NRG3P56975 720 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC37A1P57057 533 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 COPZ1P61923 177 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 RNF4P78317 190 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CD47Q08722 323 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 TSPAN31Q12999 210 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CDK5R2Q13319 367 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms