RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CBLN4Q9NTU7 201 aa17.93■□□□□ 0.46
TOP3A-219ENST00000584887 DCTN4Q9UJW0 460 aa17.93■□□□□ 0.46
TOP3A-219ENST00000584887 ADAM21Q9UKJ8 722 aa17.93■□□□□ 0.46
TOP3A-219ENST00000584887 AMDHD2Q9Y303 409 aa17.93■□□□□ 0.46
TOP3A-219ENST00000584887 CHD3Q12873 2000 aaKnown RBP17.93■□□□□ 0.46
TOP3A-219ENST00000584887 PDLIM1O00151 329 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 UBDO15205 165 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-219ENST00000584887 CRLF1O75462 422 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 KRT33AO76009 404 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 THBS1P07996 1170 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 PRG2P13727 222 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 POLR2JP52435 117 aaKnown RBP17.92■□□□□ 0.46
TOP3A-219ENST00000584887 MVDP53602 400 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 SLC25A3Q00325 362 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 MAVSQ7Z434 540 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 CLIP4Q8N3C7 705 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 C1orf162Q8NEQ5 155 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-219ENST00000584887 VPS33AQ96AX1 596 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 TMEM19Q96HH6 336 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 ZNF385AQ96PM9 386 aaKnown RBP17.92■□□□□ 0.46
TOP3A-219ENST00000584887 OR52B2Q96RD2 323 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 ZIM2Q9NZV7 527 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 DSPPQ9NZW4 1301 aa17.92■□□□□ 0.46
TOP3A-219ENST00000584887 AQP7P3A6NL99 342 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 TFPTP0C1Z6 253 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 MPGP29372 298 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 ACAA2P42765 397 aaKnown RBP17.91■□□□□ 0.46
TOP3A-219ENST00000584887 TMEM225Q6GV28 225 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 CLEC2AQ6UVW9 174 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 MIER2Q8N344 545 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 C17orf78Q8N4C9 275 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 TMEM45BQ96B21 275 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 MAELQ96JY0 434 aaKnown RBP17.91■□□□□ 0.46
TOP3A-219ENST00000584887 AMBRA1Q9C0C7 1298 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 FKRPQ9H9S5 495 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 SDR39U1Q9NRG7 319 aaPredicted RBP17.91■□□□□ 0.46
TOP3A-219ENST00000584887 ZNF232Q9UNY5 417 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 RTTNQ86VV8 2226 aa17.91■□□□□ 0.46
TOP3A-219ENST00000584887 ATRQ13535 2644 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 IGHV4-30-2A0A087WSY4 118 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 A8MVM7 634 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 FRS3O43559 492 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 ZCCHC18P0CG32 403 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 PRPS1P60891 318 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 RAB35Q15286 201 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 HIKESHIQ53FT3 197 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 RNF220Q5VTB9 566 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 C1orf140Q5VVS0 124 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 C11orf71Q6IPW1 123 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 DNM1P46Q6ZS02 220 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 MSANTD1Q6ZTZ1 278 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 SERPINA11Q86U17 422 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 ZIC4Q8N9L1 334 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 POMGNT2Q8NAT1 580 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 SF3B5Q9BWJ5 86 aaKnown RBP17.9■□□□□ 0.46
TOP3A-219ENST00000584887 ARMC7Q9H6L4 198 aa17.9■□□□□ 0.46
TOP3A-219ENST00000584887 FAM234BA2RU67 622 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 ATP6V1G2-DDX39BF2Z307 99 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 KLF11O14901 512 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 CD5LO43866 347 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 WNT11O96014 354 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 HOXC5Q00444 222 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 LGALS3BPQ08380 585 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 PRAMEF8Q5VWM4 474 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 PRAMEF7Q5VXH5 474 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 ZNF544Q6NX49 715 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 SPATA9Q9BWV2 254 aa17.89■□□□□ 0.45
TOP3A-219ENST00000584887 THUMPD1Q9NXG2 353 aaKnown RBP17.89■□□□□ 0.45
TOP3A-219ENST00000584887 A0A0G2JPF8 293 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 HNRNPCL2B2RXH8 293 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 HNRNPCL3B7ZW38 293 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 HNRNPCL1O60812 293 aaKnown RBP17.88■□□□□ 0.45
TOP3A-219ENST00000584887 AHSA1O95433 338 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 NUDT7P0C024 238 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 HNRNPCL4P0DMR1 293 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 ZSWIM7Q19AV6 140 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 ZNF311Q5JNZ3 666 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 SLC2A7Q6PXP3 512 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 ABHD12BQ7Z5M8 362 aaPredicted RBP17.88■□□□□ 0.45
TOP3A-219ENST00000584887 MAL2Q969L2 176 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 C3orf49Q96BT1 292 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 SLC25A36Q96CQ1 311 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 ALKBH3Q96Q83 286 aaPredicted RBP17.88■□□□□ 0.45
TOP3A-219ENST00000584887 MOKQ9UQ07 419 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 IFT52Q9Y366 437 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 USH1CQ9Y6N9 552 aa17.88■□□□□ 0.45
TOP3A-219ENST00000584887 C5orf58C9J3I9 102 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 ZNF587BE7ETH6 402 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 TLX2O43763 284 aaPredicted RBP17.87■□□□□ 0.45
TOP3A-219ENST00000584887 LGI1O95970 557 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 GTF2E2P29084 291 aaKnown RBP17.87■□□□□ 0.45
TOP3A-219ENST00000584887 SELENOPP49908 381 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 SLC18A1P54219 525 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 STX1BP61266 288 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 CHRNB3Q05901 458 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 RGNQ15493 299 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 NIPAL3Q6P499 406 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 ZNF525Q8N782 197 aa17.87■□□□□ 0.45
TOP3A-219ENST00000584887 TLCD1Q96CP7 247 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1114.8 ms