RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PCBP3P57721 371 aaKnown RBP13.88□□□□□ -0.19
SKA2-209ENST00000583976 RPS4XP62701 263 aaKnown RBP13.88□□□□□ -0.19
SKA2-209ENST00000583976 CBX1P83916 185 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 QPRTQ15274 297 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 TAB1Q15750 504 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 ERICH5Q6P6B1 374 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 BEND4Q6ZU67 534 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 CXXC5Q7LFL8 322 aaKnown RBP13.88□□□□□ -0.19
SKA2-209ENST00000583976 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.88□□□□□ -0.19
SKA2-209ENST00000583976 STK32CQ86UX6 486 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 LILRA2Q8N149 483 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 RNF148Q8N7C7 305 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 ZNF563Q8TA94 476 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 OSTF1Q92882 214 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 SPATA5L1Q9BVQ7 753 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 PAQR5Q9NXK6 330 aaPredicted RBP13.88□□□□□ -0.19
SKA2-209ENST00000583976 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 GPR52Q9Y2T5 361 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 RNF115Q9Y4L5 304 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 CADP27708 2225 aa13.88□□□□□ -0.19
SKA2-209ENST00000583976 RTTNQ86VV8 2226 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 ADAM11O75078 769 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 MFN2O95140 757 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 PGCP20142 388 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 CALB2P22676 271 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 IDH2P48735 452 aaKnown RBP13.87□□□□□ -0.19
SKA2-209ENST00000583976 GSK3BP49841 420 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 MNAT1P51948 309 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 DMTNQ08495 405 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 CLEC12BQ2HXU8 276 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 INTS11Q5TA45 600 aaKnown RBP13.87□□□□□ -0.19
SKA2-209ENST00000583976 RNF220Q5VTB9 566 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 RINLQ6ZS11 566 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 TUSC5Q8IXB3 177 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 MICU2Q8IYU8 434 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 DEFB107AQ8IZN7 70 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 PGAM4Q8N0Y7 254 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 ATP6V1C2Q8NEY4 427 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
SKA2-209ENST00000583976 ALG2Q9H553 416 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 EXOSC3Q9NQT5 275 aaKnown RBP13.87□□□□□ -0.19
SKA2-209ENST00000583976 GLRX2Q9NS18 164 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 TMEM181Q9P2C4 612 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 STOML1Q9UBI4 398 aa13.87□□□□□ -0.19
SKA2-209ENST00000583976 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 PRORSD1PA6NEY8 169 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 CFAP73A6NFT4 308 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 GSTA4O15217 222 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 NDUFS7O75251 213 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 UBOX5O94941 541 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 PRG2P13727 222 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 PRKCAP17252 672 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 TCN1P20061 433 aaPredicted RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 IL32P24001 234 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 ELK4P28324 431 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 PRKAR1BP31321 381 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 SESN3P58005 492 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 HOXC5Q00444 222 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 FAPQ12884 760 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 DHRS4L2Q6PKH6 230 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 C16orf89Q6UX73 402 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 PATL1Q86TB9 770 aaKnown RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 COMTD1Q86VU5 262 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 RBM15BQ8NDT2 890 aaKnown RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 CPNE4Q96A23 557 aaPredicted RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 CDRT15Q96T59 188 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 KCTD14Q9BQ13 255 aaPredicted RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
SKA2-209ENST00000583976 OR10A4Q9H209 315 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 ABCD2Q9UBJ2 740 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 ABCA1O95477 2261 aa13.86□□□□□ -0.19
SKA2-209ENST00000583976 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 OVOL3O00110 214 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 CRLF1O75462 422 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 IGHV4-39P01824 125 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 DANCRP0C864 163 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 NCK1P16333 377 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 ENPP1P22413 925 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 MSX2P35548 267 aaPredicted RBP13.85□□□□□ -0.19
SKA2-209ENST00000583976 ACVR1BP36896 505 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 CARD18P57730 90 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 BSPH1Q075Z2 132 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 EPS8Q12929 822 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 DUSP7Q16829 419 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 LRRC23Q53EV4 343 aaPredicted RBP13.85□□□□□ -0.19
SKA2-209ENST00000583976 TMEM201Q5SNT2 666 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 NCMAPQ5T1S8 102 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 PDSS1Q5T2R2 415 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 CCDC80Q76M96 950 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 FCRLAQ7L513 359 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 ZNF440Q8IYI8 595 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 FAM156AQ8NDB6 213 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 STEAP2Q8NFT2 490 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms