RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TCF7L2Q9NQB0 619 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 CTPS2Q9NRF8 586 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 CA10Q9NS85 328 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 AIG1Q9NVV5 245 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 HDGFL3Q9Y3E1 203 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.7
TOP3A-215ENST00000583328 SCAMP2O15127 329 aaKnown RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 DNPH1O43598 174 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 DNAJA2O60884 412 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 CRYAAP02489 173 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 UBTFL6P0CB48 400 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 IDO1P14902 403 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 PRPS1L1P21108 318 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 PPOXP50336 477 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 DVL1P1P54792 670 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 CLDN8P56748 225 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 LGALS3BPQ08380 585 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 SKP2Q13309 424 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 RIMKLAQ8IXN7 391 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 NEU4Q8WWR8 484 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 OR5P2Q8WZ92 322 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 ARL5BQ96KC2 179 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 SLC38A2Q96QD8 506 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 SDF2Q99470 211 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 EBF4Q9BQW3 602 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 NMUR2Q9GZQ4 415 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 PLK3Q9H4B4 646 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 CHRNA9Q9UGM1 479 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 ATP6V1HQ9UI12 483 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 FBXO9Q9UK97 447 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-215ENST00000583328 SLC9A8Q9Y2E8 581 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 PCDHB14Q9Y5E9 798 aa10.7□□□□□ -0.7
TOP3A-215ENST00000583328 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 A0A0G2JND7 137 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 TMEM89A2RUT3 159 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 VSTM5A8MXK1 200 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 ANKRD28O15084 1053 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 UBDO15205 165 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 RGS9O75916 674 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 PDE5AO76074 875 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 IFNGR1P15260 489 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CCNA2P20248 432 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 FKBP2P26885 142 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 LSP1P33241 339 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 SLC1A3P43003 542 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CLK1P49759 484 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CLNS1AP54105 237 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 GYS2P54840 703 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 SCGB2A2Q13296 93 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CCNIQ14094 377 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 EFNB3Q15768 340 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 ADIPOQQ15848 244 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 ZNF141Q15928 474 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 GSTA3Q16772 222 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 HIKESHIQ53FT3 197 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CGB2Q6NT52 195 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 DEF8Q6ZN54 512 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 EIF3MQ7L2H7 374 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 KRTCAP2Q8N6L1 136 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 NATD1Q8N6N6 113 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 UBASH3BQ8TF42 649 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 WDR60Q8WVS4 1066 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 THOC1Q96FV9 657 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 OR7D2Q96RA2 312 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 PRPF18Q99633 342 aaKnown RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 NAA11Q9BSU3 229 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-215ENST00000583328 KATNB1Q9BVA0 655 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 CCDC106Q9BWC9 280 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 DPY30Q9C005 99 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 OR11A1Q9GZK7 315 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 ATAD3AQ9NVI7 634 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 GPATCH2Q9NW75 528 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 TMEM181Q9P2C4 612 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 FLVCR1Q9Y5Y0 555 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 GPR45Q9Y5Y3 372 aa10.69□□□□□ -0.7
TOP3A-215ENST00000583328 B4DSR2 109 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 FAM157AC9JC47 383 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 E9PBE3 544 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 TRIM77I1YAP6 450 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 hCG_2039718K7EN88 272 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
TOP3A-215ENST00000583328 C6orf47O95873 294 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 LAMP1P11279 417 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 RYKP34925 604 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 UBE2NP61088 152 aaKnown RBP10.68□□□□□ -0.7
TOP3A-215ENST00000583328 GNGT1P63211 74 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 SLC35A1P78382 337 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 TRIP10Q15642 601 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 PDCD4Q53EL6 469 aaKnown RBP10.68□□□□□ -0.7
TOP3A-215ENST00000583328 ANKRD16Q6P6B7 361 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 GRINAQ7Z429 371 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 ZNF786Q8N393 782 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 OR7A2PQ8NGA2 310 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 OR5D16Q8NGK9 328 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 FAM216AQ8WUB2 273 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 TESCQ96BS2 214 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms