RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR9Q1Q8NGQ5 310 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR4Q3Q8NH05 313 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 AGAP4Q96P64 663 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TAPBPLQ9BX59 468 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR2B2Q9GZK3 357 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KRCC1Q9NPI7 259 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ATP13A2Q9NQ11 1180 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL17BQ9UHF5 180 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NXT1Q9UKK6 140 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FARSAQ9Y285 508 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LSM2Q9Y333 95 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PCDHGB6Q9Y5F9 930 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 N6AMT1Q9Y5N5 214 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SERINC4A6NH21 518 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TM4SF5O14894 197 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PRODHO43272 600 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC2A10O95528 541 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IFI30P13284 250 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PSMA1P25786 263 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SOX6P35712 828 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 STAT5AP42229 794 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ACAA2P42765 397 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CCR4P51679 360 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDH11P55287 796 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 GABREP78334 506 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF141Q15928 474 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ATAD3CQ5T2N8 411 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NANOGP1Q8N7R0 232 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 UBQLN4Q9NRR5 601 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 A3GALT2U3KPV4 340 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FAM183AA6NL82 134 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SOCS6O14544 535 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SCO2O43819 266 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TSPAN2O60636 221 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TPPPO94811 219 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DKK1O94907 266 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SAGP10523 405 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TNFSF8P32971 234 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DLSTP36957 453 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL10RAQ13651 578 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FGFBP1Q14512 234 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TAB1Q15750 504 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC35F1Q5T1Q4 408 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF620Q6ZNG0 422 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR8H2Q8N162 312 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CADM2Q8N3J6 435 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PROKR2Q8NFJ6 384 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 GATAD2BQ8WXI9 593 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 POLE3Q9NRF9 147 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C20orf141Q9NUB4 165 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 H2AFY2Q9P0M6 372 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C19orf25Q9UFG5 118 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DIMT1Q9UNQ2 313 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NPFFR2Q9Y5X5 522 aa11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SPIN1Q9Y657 262 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LOC110117498-PIK3R3F6TDL0 507 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TSPAN19P0C672 248 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CRYBB2P43320 205 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SPANXN2Q5MJ10 180 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C22orf42Q6IC83 251 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PPP1R32Q7Z5V6 425 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR2T33Q8NG76 320 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR6F1Q8NGZ6 308 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TMEM239Q8WW34 195 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TM9SF4Q92544 642 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DNAJA3Q96EY1 480 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NEDD4LQ96PU5 975 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZPBPQ9BS86 351 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DEFB126Q9BYW3 111 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 GALNT9Q9HCQ5 603 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MYOTQ9UBF9 498 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DMXL2Q8TDJ6 3036 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LOC102723996A0A087X1L8 192 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SCDO00767 359 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 EIF3IQ13347 325 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PGGHGQ32M88 737 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BBS1Q8NFJ9 593 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NLGN4YQ8NFZ3 816 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR4F15Q8NGB8 312 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DCLRE1CQ96SD1 692 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TIGARQ9NQ88 270 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CCDC59Q9P031 241 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 A8MV72 311 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DVL2O14641 736 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SURF4O15260 269 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SOX30O94993 753 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR2B6P58173 313 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DCAF7P61962 342 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 Q0VFX4 171 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms