RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 BTBD16Q32M84 506 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 CRTC2Q53ET0 693 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 LIPKQ5VXJ0 399 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 MINDY2Q8NBR6 621 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 GALNT6Q8NCL4 622 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 ATP6V1C2Q8NEY4 427 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 OR4F15Q8NGB8 312 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 OR2Y1Q8NGV0 311 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 OR2T4Q8NH00 348 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 OR4K13Q8NH42 304 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 MOSPD2Q8NHP6 518 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 SPRYD4Q8WW59 207 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 SMPDL3BQ92485 455 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 HGDQ93099 445 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 NECAB3Q96P71 396 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 SNX18Q96RF0 628 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 CNN2Q99439 309 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 ALG8Q9BVK2 526 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 DDA1Q9BW61 102 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 NXF2Q9GZY0 626 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 PTGES2Q9H7Z7 377 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 PPP4R1LQ9P1A2 415 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 POLHQ9Y253 713 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 YARS2Q9Y2Z4 477 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 SCN2AQ99250 2005 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 IGKV1D-42A0A075B6H8 117 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 MCIDASD6RGH6 385 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 LOC110117498-PIK3R3F6TDL0 507 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 J3QRE1 110 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 WWP2O00308 870 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 PHYHO14832 338 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 PLD2O14939 933 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 ZNF208O43345 1280 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 OIP5O43482 229 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 GPX5O75715 221 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 GLCEO94923 617 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 FBXO45P0C2W1 286 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 JMJD7P0C870 316 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 CFL1P23528 166 aaKnown RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 AQP2P41181 271 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 SOX3P41225 446 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 CRYBB2P43320 205 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 PPP5CP53041 499 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 DLX5P56178 289 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 RPS15P62841 145 aaKnown RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 GGTLC2Q14390 218 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 SGCBQ16585 318 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 COL28A1Q2UY09 1125 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 SPANXN2Q5MJ10 180 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 FAM69BQ5VUD6 431 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 C1orf140Q5VVS0 124 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 C6orf15Q6UXA7 325 aaPredicted RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 NDUFAF7Q7L592 441 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 SYS1Q8N2H4 156 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 MS4A15Q8N5U1 240 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 BBS1Q8NFJ9 593 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 OR5J2Q8NH18 312 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 ELP5Q8TE02 316 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 WDR77Q9BQA1 342 aaPredicted RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 CENPOQ9BU64 300 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 KATNB1Q9BVA0 655 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 POTEKPQ9BYX7 375 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 SLIRPQ9GZT3 109 aaKnown RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 C6orf62Q9GZU0 229 aaPredicted RBP10.12□□□□□ -0.79
SKA2-204ENST00000578519 ENKD1Q9H0I2 346 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 INIPQ9NRY2 104 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 LOXL2Q9Y4K0 774 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 TMEM14AQ9Y6G1 99 aa10.12□□□□□ -0.79
SKA2-204ENST00000578519 A0A087WZY1 265 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 IGLV3-32A0A0A0MS00 114 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 NSG1A0A0A6YYJ2 146 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 A0A1W2PRG6 482 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CCDC182A6NF36 153 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 A6NIZ1 184 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CENPBD1B2RD01 187 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 PRKNO60260 465 aaPredicted RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 BGLAPP02818 100 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CD1AP06126 327 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ZNF806P0C7X5 589 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CCL4P13236 92 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CELP19835 753 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SLC2A5P22732 501 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 UQCRC1P31930 480 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 OPRL1P41146 370 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 EIF1P41567 113 aaKnown RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 EFNA3P52797 238 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 LIMK1P53667 647 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 FBXW4P57775 412 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 RAP1BP61224 184 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 RPS3AP61247 264 aaKnown RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 RAP1AP62834 184 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ERVK-25P63136 954 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SSPNQ14714 243 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 NTRK2Q16620 822 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 RGS21Q2M5E4 152 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ZNF362Q5T0B9 420 aaPredicted RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 OR2G6Q5TZ20 316 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms