RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ACRP10323 421 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 CD53P19397 219 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZP3P21754 424 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 NAXEQ8NCW5 288 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 BBS1Q8NFJ9 593 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR51S1Q8NGJ8 323 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR10R2Q8NGX6 335 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC22A12Q96S37 553 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 HIF3AQ9Y2N7 669 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 LDB3O75112 727 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 IGLV3-27P01718 113 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 MAKP20794 623 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 RFX2P48378 723 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 FAM27D1Q5T7N8 215 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR5M10Q6IEU7 315 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM200AQ86VY9 491 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR51D1Q8NGF3 324 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ALG12Q9BV10 488 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 HHLA2Q9UM44 414 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 A0A0B4J203 849 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 B4DGG1 531 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF593O00488 134 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 BLKP51451 505 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 PDX1P52945 283 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 PDZK1IP1Q13113 114 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 EXOSC7Q15024 291 aaKnown RBP12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 BHLHA9Q7RTU4 235 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF679Q8IYX0 411 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 ANKRD53Q8N9V6 530 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 CLRN3Q8NCR9 226 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR6N1Q8NGY5 312 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC25A32Q9H2D1 315 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF850A8MQ14 1090 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 PNMTP11086 282 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CDK2P24941 298 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CLDN2P57739 230 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF750Q32MQ0 723 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 TCEAL6Q6IPX3 200 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC2A12Q8TD20 617 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CRB3Q9BUF7 120 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF768Q9H5H4 540 aaKnown RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 PLEKHB1Q9UF11 243 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CDK5RAP2Q96SN8 1893 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 COL4A1P02462 1669 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 H3BUI4 141 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SYT7O43581 403 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ADH1BP00325 375 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 TNFP01375 233 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF250P15622 560 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 PGCP20142 388 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 HCCSP53701 268 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 LTB4RQ15722 352 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 METTL27Q8N6F8 245 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ELOVL3Q9HB03 270 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SMCO4Q9NRQ5 59 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF629Q9UEG4 869 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 A0A1W2PQU0 124 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 RHPN2P1A8MT19 583 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 NR2C1P13056 603 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 S100PP25815 95 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 RAB5CP51148 216 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 GPR18Q14330 331 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 PAN3Q58A45 887 aaKnown RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ADGRG3Q86Y34 549 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CMTM4Q8IZR5 234 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZFP82Q8N141 532 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 C2CD4CQ8TF44 421 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 TTC9Q92623 222 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 AUNIPQ9H7T9 357 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 MCCC2Q9HCC0 563 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 PRSS16Q9NQE7 514 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZFP57Q9NU63 452 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 URB1O60287 2271 aaKnown RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC5A10A0PJK1 596 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 RGS11O94810 467 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 IGHA2P01877 340 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 HMGA2P52926 109 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF628Q5EBL2 1059 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 NIPAL3Q6P499 406 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC16A11Q8NCK7 471 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms