RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CHID1Q9BWS9 393 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 ASPNQ9BXN1 380 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 ANKRD19PQ9H560 264 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 ERRFI1Q9UJM3 462 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 TMCC3Q9ULS5 477 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 SMG1Q96Q15 3661 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 CACNA1CQ13936 2221 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 FREM1Q5H8C1 2179 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 HSPB2A8KAH6 182 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 FKBP6O75344 327 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 KRT36O76013 467 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 AQP8O94778 261 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 PRSS23O95084 383 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 AKR7A3O95154 331 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 CH25HO95992 272 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 HIST1H2ABP04908 130 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 TMIGD3P0DMS9 266 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 IFI30P13284 250 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 MAGEA2P43356 314 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 AGFG1P52594 562 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 UGT2B15P54855 530 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 CTBP2P56545 445 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 IL1RL1Q01638 556 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 RNPS1Q15287 305 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 HSPB2Q16082 182 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 IQCCQ4KMZ1 466 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 OTUD3Q5T2D3 398 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 RIPPLY2Q5TAB7 128 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 TMEM225Q6GV28 225 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 SEM1Q6ZVN7 128 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 HIST3H2AQ7L7L0 130 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 SLC43A2Q8N370 569 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 MARVELD2Q8N4S9 558 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 OR6S1Q8NH40 331 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 ACOT11Q8WXI4 607 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 HIST1H2ACQ93077 130 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 INTS12Q96CB8 462 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 CCDC120Q96HB5 630 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 ZFP3Q96NJ6 502 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 PTDSS2Q9BVG9 487 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 REEP1Q9H902 201 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 CCM2LQ9NUG4 571 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-218ENST00000574964 A0A1W2PRQ8 180 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 ENO4A6NNW6 628 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 TNFRSF11BO00300 401 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 SMAD9O15198 467 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 RCBTB2O95199 551 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 OR6A2O95222 327 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 CST1P01037 141 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 GRPRP30550 384 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 RASGEF1BQ0VAM2 473 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 CCNIQ14094 377 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 DGCR6Q14129 220 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 OR2T5Q6IEZ7 315 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 PODNL1Q6PEZ8 512 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 NRMQ8IXM6 262 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 RNF113BQ8IZP6 322 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 GCNT2Q8N0V5 402 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 OR2T29Q8NH02 315 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 ABHD3Q8WU67 409 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 SDCCAG3Q96C92 435 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 ALPK1Q96QP1 1244 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 ZNF426Q9BUY5 554 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 RNF122Q9H9V4 155 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 KRCC1Q9NPI7 259 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 NANSQ9NR45 359 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 GLRX2Q9NS18 164 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 KLHL9Q9P2J3 617 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 CLEC4AQ9UMR7 237 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
NPLOC4-218ENST00000574964 A0A087WUU8 490 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 A0A0G2JNJ9 132 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 TRBV4-1A0A0J9YWV2 114 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 HTR3EA5X5Y0 456 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 FTCDNL1E5RQL4 147 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 LRRN3E7EW58 273 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 M0R082 166 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 PIP5K1CO60331 668 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 CYTIPO60759 359 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 TOXO94900 526 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 BGLAPP02818 100 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 FUT1P19526 365 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 CTSSP25774 331 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 CEACAM8P31997 349 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 ACTR3P61158 418 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 SIRPAP78324 504 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 LTBQ06643 244 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 PMS2P3Q13401 168 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 ZNF74Q16587 644 aa12.96□□□□□ -0.33
NPLOC4-218ENST00000574964 TMEM201Q5SNT2 666 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms