RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TRIM13O60858 407 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 FGF4P08620 206 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 CELA3BP08861 270 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 FAM153BP0C7A2 387 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 PCMT1P22061 227 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 THBS4P35443 961 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 HGFACQ04756 655 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 CEACAM7Q14002 265 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 OR7A5Q15622 319 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 ADRM1Q16186 407 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 ATAD3BQ5T9A4 648 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 LINGO2Q7L985 606 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 CDK20Q8IZL9 346 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 C4orf33Q8N1A6 199 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 OR4F15Q8NGB8 312 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 OR4A15Q8NGL6 344 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 SGMS2Q8NHU3 365 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 UBASH3BQ8TF42 649 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 OIT3Q8WWZ8 545 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 TPK1Q9H3S4 243 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 DYNLRB1Q9NP97 96 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 CRNNQ9UBG3 495 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-206ENST00000572083 PKD1L1Q8TDX9 2849 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 SMIM23A6NLE4 172 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 NPR2P20594 1047 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 COMPP49747 757 aaPredicted RBP17.18■□□□□ 0.34
CCDC40-206ENST00000572083 SELENOPP49908 381 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 GLCCI1Q86VQ1 547 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 NUP37Q8NFH4 326 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 MIPOL1Q8TD10 442 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 BCL2L2Q92843 193 aaPredicted RBP17.18■□□□□ 0.34
CCDC40-206ENST00000572083 PMM1Q92871 262 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 GCDHQ92947 438 aaPredicted RBP17.18■□□□□ 0.34
CCDC40-206ENST00000572083 DOK1Q99704 481 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 SAP130Q9H0E3 1048 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 NELFAQ9H3P2 528 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 NARFLQ9H6Q4 476 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 ZNF442Q9H7R0 627 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 LPAR2Q9HBW0 351 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 POLE3Q9NRF9 147 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.18■□□□□ 0.34
CCDC40-206ENST00000572083 MID2Q9UJV3 735 aa17.18■□□□□ 0.34
CCDC40-206ENST00000572083 FBXO9Q9UK97 447 aaPredicted RBP17.18■□□□□ 0.34
CCDC40-206ENST00000572083 ARPC4-TTLL3A0A0A6YYG9 625 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 TMEM129A0AVI4 362 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 LIPT2A6NK58 231 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 AQP7P3A6NL99 342 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 B4DSR2 109 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 IGLV1-44P01699 117 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 GPIP06744 558 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 IGFBP1P08833 259 aaPredicted RBP17.17■□□□□ 0.34
CCDC40-206ENST00000572083 G6PDP11413 515 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 KRT4P19013 534 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 HPCAP84074 193 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 GPAT3Q53EU6 434 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 THSD4Q6ZMP0 1018 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 DEF8Q6ZN54 512 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 CNPY4Q8N129 248 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 MECRQ9BV79 373 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 SF3B5Q9BWJ5 86 aaKnown RBP17.17■□□□□ 0.34
CCDC40-206ENST00000572083 HIF1ANQ9NWT6 349 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 TRRAPQ9Y4A5 3859 aa17.17■□□□□ 0.34
CCDC40-206ENST00000572083 PRAMEF27A3QJZ7 478 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 NPHS1O60500 1241 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 AGR2O95994 175 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 SHBGP04278 402 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 GUSBP08236 651 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 ADRA2AP08913 450 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 C3orf36Q3SXR2 165 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 AP1ARQ63HQ0 302 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 UGT2A3Q6UWM9 527 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 ZCCHC23Q6ZST2 131 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 ANKRD46Q86W74 232 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 ZNF418Q8TF45 676 aaPredicted RBP17.16■□□□□ 0.34
CCDC40-206ENST00000572083 CKAP2Q8WWK9 683 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
CCDC40-206ENST00000572083 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
CCDC40-206ENST00000572083 TXLNGYQ9BZA5 131 aa17.16■□□□□ 0.34
CCDC40-206ENST00000572083 SCN2BO60939 215 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 UPK3AO75631 287 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 IGKV3-15P01624 115 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 ALDH3A1P30838 453 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 KHKP50053 298 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 SHQ1Q6PI26 577 aaKnown RBP17.15■□□□□ 0.34
CCDC40-206ENST00000572083 MNS1Q8NEH6 495 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 TMEM186Q96B77 213 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 TUBGCP3Q96CW5 907 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 ADPRHL2Q9NX46 363 aa17.15■□□□□ 0.34
CCDC40-206ENST00000572083 IGHV2OR16-5A0A0B4J2B6 119 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 TMEM89A2RUT3 159 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 OR6C65A6NJZ3 312 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 FAM157AC9JC47 383 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 RNASET2O00584 256 aaKnown RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 CPSF4O95639 269 aaKnown RBP17.14■□□□□ 0.33
CCDC40-206ENST00000572083 C1QCP02747 245 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 PAX7P23759 505 aa17.14■□□□□ 0.33
CCDC40-206ENST00000572083 ARRB2P32121 409 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms