RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TMEM184BQ9Y519 407 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 DENND4AQ7Z401 1863 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CENPXA8MT69 81 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 IDSB3KWA1 339 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CHP2O43745 196 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 NKX2-2O95096 273 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MYF5P13349 255 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RNH1P13489 461 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MAP2K3P46734 347 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR1D4P47884 311 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 KIAA0895LQ68EN5 471 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CD200R1LQ6Q8B3 271 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MEX3BQ6ZN04 569 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RTL4Q6ZR62 310 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RHOUQ7L0Q8 258 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 THNSL2Q86YJ6 484 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RNF113BQ8IZP6 322 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF321PQ8N8H1 164 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ABHD4Q8TB40 342 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZPLD1Q8TCW7 415 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SNX33Q8WV41 574 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZNRF4Q8WWF5 429 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 GHSRQ92847 366 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RASD2Q96D21 266 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZFP3Q96NJ6 502 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 TSSK2Q96PF2 358 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 GAL3ST4Q96RP7 486 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 NRSN2Q9GZP1 204 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RNF121Q9H920 327 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MCCC2Q9HCC0 563 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 Q9N2J8 555 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SLC35A3Q9Y2D2 325 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 HS3ST3A1Q9Y663 406 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ARID1BQ8NFD5 2236 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CLDN4O14493 209 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 FOXS1O43638 330 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 S1PR1P21453 382 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 DRD5P21918 477 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RPS4Y1P22090 263 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SRP9P49458 86 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 EVX1P49640 407 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 FOXL2P58012 376 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 GPR85P60893 370 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SGCAQ16586 387 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 TMPRSS11FQ6ZWK6 438 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF454Q8N9F8 522 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CHAC2Q8WUX2 184 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CTHRC1Q96CG8 243 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MED18Q9BUE0 208 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR8D2Q9GZM6 311 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SPRTNQ9H040 489 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 KCNN2Q9H2S1 579 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ADGRL4Q9HBW9 690 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ISYNA1Q9NPH2 558 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ASB6Q9NWX5 421 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CFAP54Q96N23 3096 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 A0A0B4J293 547 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SMLR1H3BR10 107 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 H3BUI4 141 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 H7C1C5 153 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 EEF1E1O43324 174 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 LANCL1O43813 399 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 SELENOFO60613 162 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 RPP14O95059 124 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 EIF4EP06730 217 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 PEPDP12955 493 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 TALDO1P37837 337 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 LCN6P62502 163 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 IFITM2Q01629 132 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF85Q03923 595 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 C17orf67Q0P5P2 114 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CCINQ13939 588 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 TATDN3Q17R31 274 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ODF4Q2M2E3 257 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CLVS2Q5SYC1 327 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 TTLL10Q6ZVT0 673 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 IZUMO1Q8IYV9 350 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 DNAJC5GQ8N7S2 189 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR4M1Q8NGD0 313 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR6S1Q8NH40 331 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 PRR7Q8TB68 274 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 DACT3Q96B18 629 aaPredicted RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 ST6GAL2Q96JF0 529 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 OR10A5Q9H207 317 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 POMT2Q9UKY4 750 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 CA14Q9ULX7 337 aa8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MRPS33Q9Y291 106 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 AK6Q9Y3D8 172 aaKnown RBP8.04□□□□□ -1.12
LINC00558-201ENST00000569422 MN1Q10571 1320 aaPredicted RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ANKRD61A6NGH8 418 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 OR6C70A6NIJ9 312 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms