RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CASP12Q6UXS9 341 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 HACD2Q6Y1H2 254 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 KRT73Q86Y46 540 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 WFDC11Q8NEX6 87 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 LRRC37BQ96QE4 947 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 NAA11Q9BSU3 229 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 RSPO3Q9BXY4 272 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ARMC7Q9H6L4 198 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 PRDM4Q9UKN5 801 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ANGPT4Q9Y264 503 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 A0A1W2PR80 420 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF208O43345 1280 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 SMPD2O60906 423 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 RAD51DO75771 328 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 AKR7A3O95154 331 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 IGHV1-2P23083 117 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 PRKAR1BP31321 381 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 IDUAP35475 653 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 FAPQ12884 760 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 P2RY6Q15077 328 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 OTUD3Q5T2D3 398 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 FAM91A1Q658Y4 838 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 Q6ZT83 130 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ARPINQ7Z6K5 226 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 P3H2Q8IVL5 708 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC30A8Q8IWU4 369 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 TMEM99Q8N816 258 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC35B4Q969S0 331 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 PERPQ96FX8 193 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF583Q96ND8 569 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF607Q96SK3 696 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 HOPXQ9BPY8 73 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ECSITQ9BQ95 431 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 SPATA5L1Q9BVQ7 753 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 TAPBPLQ9BX59 468 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 HDHD5Q9BXW7 423 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ADAM19Q9H013 955 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 BEX4Q9NWD9 120 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ADPRHL2Q9NX46 363 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 RPS6KB2Q9UBS0 482 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 ARID1AO14497 2285 aa12.05□□□□□ -0.48
VPS9D1-204ENST00000565023 CIB4A0PJX0 185 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 GPR171O14626 319 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 MFN2O95140 757 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 PTNP21246 168 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 NTF4P34130 210 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 NR1H2P55055 460 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 FOXG1P55316 489 aaPredicted RBP12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 VMACQ2NL98 169 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 DHRS4L2Q6PKH6 230 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 GPAT4Q86UL3 456 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC15A3Q8IY34 581 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 OR52E4Q8NGH9 312 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 AKAP1Q92667 903 aaKnown RBP eCLIP12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 PIGTQ969N2 578 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 C3orf49Q96BT1 292 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC25A36Q96CQ1 311 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 POTEKPQ9BYX7 375 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 OR10A4Q9H209 315 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 PIF1Q9H611 641 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 CMTM6Q9NX76 183 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 TRAPPC4Q9Y296 219 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 AP3M1Q9Y2T2 418 aa12.04□□□□□ -0.48
VPS9D1-204ENST00000565023 IGKV3D-15A0A087WSY6 115 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 PRORSD1PA6NEY8 169 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 LIPT2A6NK58 231 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 M0QX08 132 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 DNPH1O43598 174 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 TPST1O60507 370 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 EIF1BO60739 113 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 SERPINB7O75635 380 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 GPIP06744 558 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 CD3EP07766 207 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 GGT1P19440 569 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 NUDT2P50583 147 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 DMTNQ08495 405 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 VEZF1Q14119 521 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 PDK3Q15120 406 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 PPA1Q15181 289 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 GLIPR1L2Q4G1C9 344 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 Q5PR19 223 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 INTS11Q5TA45 600 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 ERICH5Q6P6B1 374 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 CCDC80Q76M96 950 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 PATL1Q86TB9 770 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 COMTD1Q86VU5 262 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 ARMC8Q8IUR7 673 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 FITM2Q8N6M3 262 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms