RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 COPEO14579 308 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 UPK3AO75631 287 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CYP7B1O75881 506 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CSTAP01040 98 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 GAAP10253 952 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TFPIP10646 304 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 UROSP10746 265 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CDH2P19022 906 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 COL8A2P25067 703 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CRHR1P34998 444 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 APOBEC1P41238 236 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CCT3P49368 545 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 SELENOPP49908 381 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OR2B6P58173 313 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 UBA52P62987 128 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 POU3F1Q03052 451 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 PTGR1Q14914 329 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 GPR68Q15743 365 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 UGT3A2Q3SY77 523 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CEP85LQ5SZL2 805 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TYW3Q6IPR3 259 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TREML4Q6UXN2 200 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 GRINAQ7Z429 371 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 C1QL2Q7Z5L3 287 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 RIMKLAQ8IXN7 391 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM99Q8N816 258 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OR9K2Q8NGE7 335 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OR56A1Q8NGH5 318 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 SFXN5Q8TD22 340 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 MAGEE2Q8TD90 523 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 ADAMTS15Q8TE58 950 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF418Q8TF45 676 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CNOT9Q92600 299 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 ZDHHC16Q969W1 377 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 CHMP6Q96FZ7 201 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 LRRC37BQ96QE4 947 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 MRPL37Q9BZE1 423 aaKnown RBP8.91□□□□□ -0.98
SF3B3-204ENST00000563739 RAB1BQ9H0U4 201 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OBP2BQ9NPH6 170 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TREM2Q9NZC2 230 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM181Q9P2C4 612 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 DCDC2Q9UHG0 476 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OPN4Q9UHM6 478 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 OSGIN1Q9UJX0 560 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 USP22Q9UPT9 525 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TRAPPC4Q9Y296 219 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 DNAJC15Q9Y5T4 150 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TANC2Q9HCD6 1990 aa8.91□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM229AB2RXF0 380 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 TRIM77I1YAP6 450 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 RGS16O15492 202 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 PLIN3O60664 434 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 SNUPNO95149 360 aaKnown RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 WNT11O96014 354 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ADRA2AP08913 450 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 HKR1P10072 659 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ADRA2CP18825 462 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 CCNA2P20248 432 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 NPR2P20594 1047 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ARRB2P32121 409 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 MAGEA8P43361 318 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 CCT5P48643 541 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 HBA1P69905 142 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 IL1RL1Q01638 556 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 GABPB1Q06547 395 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ARHGAP11BQ3KRB8 267 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 CCDC153Q494R4 210 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 MIDNQ504T8 468 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 HSP90B2PQ58FF3 399 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 XKR7Q5GH72 579 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 KANK2Q63ZY3 851 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 PAQR6Q6TCH4 344 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 SPATA21Q7Z572 469 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 CROCCP2Q86T23 111 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 LRP11Q86VZ4 500 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 EPHX4Q8IUS5 362 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 WDFY1Q8IWB7 410 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 KRTCAP2Q8N6L1 136 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 CKAP2Q8WWK9 683 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 OR5P2Q8WZ92 322 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 DVL3Q92997 716 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 COQ8BQ96D53 544 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 AURKBQ96GD4 344 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF275Q9NSD4 429 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-204ENST00000563739 ARMCX1Q9P291 453 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 UPB1Q9UBR1 384 aa8.9□□□□□ -0.98
SF3B3-204ENST00000563739 A0A096LPE4 126 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 TMED7-TICAM2A0A0A6YYA0 188 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 A0A1W2PPZ6 126 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 LIPT2A6NK58 231 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 AQP7P3A6NL99 342 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SCN2BO60939 215 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 AKR7A3O95154 331 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 PNPP00491 289 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 CRYAAP02489 173 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 LINC00032P0C843 101 aa8.89□□□□□ -0.99
SF3B3-204ENST00000563739 SAGP10523 405 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms