RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 PGLYRP4Q96LB8 373 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 RPRD1AQ96P16 312 aaPredicted RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 NPY6RQ99463 290 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 NMUR2Q9GZQ4 415 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 FN3KRPQ9HA64 309 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 NUDT15Q9NV35 164 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 COX16Q9P0S2 106 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 HPCAL4Q9UM19 191 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 PRPF19Q9UMS4 504 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 SHPRHQ149N8 1683 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 TMEM2Q9UHN6 1383 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 ARHGAP35Q9NRY4 1499 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 CLIP1P30622 1438 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 ADAMTS9Q9P2N4 1935 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 IGHV7-81A0A0B4J1V7 117 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 A0A1B0GVL5 298 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 POLR2DO15514 142 aaKnown RBP4.49□□□□□ -1.69
SMG1-204ENST00000561940 ZNF264O43296 627 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 TIMM8AO60220 97 aaPredicted RBP4.49□□□□□ -1.69
SMG1-204ENST00000561940 AP2A1O95782 977 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 LGALS2P05162 132 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 ZNF853P0CG23 659 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 HSMCR30P0CW71 290 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PBLDP30039 288 aaPredicted RBP4.49□□□□□ -1.69
SMG1-204ENST00000561940 SEC61GP60059 68 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 ISXQ2M1V0 245 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PHYHD1Q5SRE7 291 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 C1orf220Q5T0J3 134 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 TFAP2EQ6VUC0 442 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 DNM1P46Q6ZS02 220 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 CCDC50Q8IVM0 306 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PLEKHF1Q96S99 279 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 RNF2Q99496 336 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PARD6BQ9BYG5 372 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 YY1AP1Q9H869 796 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 MCCC2Q9HCC0 563 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PLSCR3Q9NRY6 295 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 STAP1Q9ULZ2 295 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 SLIT1O75093 1534 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 PRXQ9BXM0 1461 aa4.49□□□□□ -1.69
SMG1-204ENST00000561940 CLTCQ00610 1675 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 TROQ12816 1431 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 KIDINS220Q9ULH0 1771 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 KIF14Q15058 1648 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 IGKV1D-8A0A087WSZ0 117 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 ARHGEF35A5YM69 484 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 SNTNA6NMZ2 147 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 IDSB3KWA1 339 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 FCMRO60667 390 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 ECI2O75521 394 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 STAMBPO95630 424 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 AZU1P20160 251 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 NPR2P20594 1047 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 PSMB1P20618 241 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 COX5AP20674 150 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 NTSP30990 170 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 DUSP3P51452 185 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 HMGN5P82970 282 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 CHRNB3Q05901 458 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 NCBP1Q09161 790 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 CCDC173Q0VFZ6 552 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 DDX39BQ13838 428 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 NSUN5P1Q3KNT7 163 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 PRR30Q53SZ7 412 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 ACOT7LQ6ZUV0 252 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 FAM220AQ7Z4H9 259 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 PPP1R27Q86WC6 154 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 OR52I1Q8NGK6 324 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 OR13C2Q8NGS9 318 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 FGF11Q92914 225 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 EFHD2Q96C19 240 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 C10orf35Q96D05 121 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 COPS8Q99627 209 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 HYPKQ9NX55 129 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 HOXC10Q9NYD6 342 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 PIGLQ9Y2B2 252 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 RPAP1Q9BWH6 1393 aaPredicted RBP4.48□□□□□ -1.69
SMG1-204ENST00000561940 NCOA2Q15596 1464 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 CEP350Q5VT06 3117 aa4.48□□□□□ -1.69
SMG1-204ENST00000561940 TTC21BQ7Z4L5 1316 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 DISP2A7MBM2 1401 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 BTBD17A6NE02 478 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 DCTN6O00399 190 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 SNX4O95219 450 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 SERPINA3P01011 423 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 TIMP1P01033 207 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 CCDC130P13994 396 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 GNA11P29992 359 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 NDPQ00604 133 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 DPYSL2Q16555 572 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 CFAP221Q4G0U5 840 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 BOLA3Q53S33 107 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 OR2A2Q6IF42 318 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 UNQ9370/PRO34162Q6UXP9 181 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 ARCQ7LC44 396 aa4.47□□□□□ -1.69
SMG1-204ENST00000561940 CCDC65Q8IXS2 484 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms