RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 FUT1P19526 365 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PCMT1P22061 227 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 F8A1P23610 371 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 DLSTP36957 453 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PTGDSP41222 190 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SLC9A3P48764 834 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SSR4P51571 173 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 NUDT6P53370 316 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SUMO3P55854 103 aaPredicted RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 MLF1P58340 268 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 EFNB1P98172 346 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PIGFQ07326 219 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 CRYZQ08257 329 aaKnown RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 C17orf67Q0P5P2 114 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 Q0VFX4 171 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 CHAF1BQ13112 559 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 QPRTQ15274 297 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 TOMM34Q15785 309 aaPredicted RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 OCLNQ16625 522 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 CLEC12AQ5QGZ9 265 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SLC25A30Q5SVS4 291 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ATP1A1-AS1Q5TC04 95 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 XAF1Q6GPH4 301 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SMARCD3Q6STE5 483 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OPN5Q6U736 354 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ASB18Q6ZVZ8 466 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PRSS48Q7RTY5 328 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SLC46A3Q7Z3Q1 461 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 DND1Q8IYX4 353 aaKnown RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 SPARTQ8N0X7 666 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SLC43A2Q8N370 569 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 TCEANCQ8N8B7 351 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PLPP7Q8NBV4 271 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ZNF540Q8NDQ6 660 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR2T33Q8NG76 320 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR52L1Q8NGH7 329 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR8J1Q8NGP2 316 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR4Q3Q8NH05 313 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SGTBQ96EQ0 304 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 Q96MT0 163 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SLC38A2Q96QD8 506 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 IL4I1Q96RQ9 567 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 RBM38Q9H0Z9 239 aaKnown RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR52D1Q9H346 318 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 UBQLN3Q9H347 655 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 MCCC2Q9HCC0 563 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 GALNT9Q9HCQ5 603 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 VCX3AQ9NNX9 186 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 TAS2R10Q9NYW0 307 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 TVP23BQ9NYZ1 205 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 DNAJC27Q9NZQ0 273 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 NDUFA13Q9P0J0 144 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ERVK-18Q9QC07 812 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PSORS1C1Q9UIG5 152 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SIGLEC7Q9Y286 467 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 YARS2Q9Y2Z4 477 aaKnown RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 SNX5Q9Y5X3 404 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ZGRF1Q86YA3 2104 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 CCDC168Q8NDH2 2452 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PCNX3Q9H6A9 2034 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 TRAV27A0A087WT01 109 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 EFCAB10A6NFE3 127 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 CLCA1A8K7I4 914 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 B4DXG7 233 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 RNF223E7ERA6 249 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 ETV2O00321 342 aaPredicted RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 BHLHE40O14503 412 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 TP53I11O14683 189 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 SURF4O15260 269 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 TLX2O43763 284 aaPredicted RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 GMFGO60234 142 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 MAN1A2O60476 641 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 PTP4A3O75365 173 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 NUDT14O95848 222 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 MT-ND2P03891 347 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 HMGN1P05114 100 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 SERPINA7P05543 415 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 CDK1P06493 297 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 PIPP12273 146 aaPredicted RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 PRF1P14222 555 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 MSX1P28360 303 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 TACR3P29371 465 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 GRK5P34947 590 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 SLC15A1P46059 708 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 HTR3AP46098 478 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 POLR2HP52434 150 aaKnown RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 DLX5P56178 289 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 PMS2P3Q13401 168 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 MRPL49Q13405 166 aaKnown RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 SNTA1Q13424 505 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 FHL1Q13642 323 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 ATP1A4Q13733 1029 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 NEDD8Q15843 81 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 SNAPC1Q16533 368 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 EIF2S3LQ2VIR3 472 aaKnown RBP6.81□□□□□ -1.32
TPM1-231ENST00000561395 ZBED5Q49AG3 693 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 SYT14P1Q58G82 188 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 MEDAGQ5VYS4 303 aa6.81□□□□□ -1.32
TPM1-231ENST00000561395 BICRALQ6AI39 1079 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms