RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PDE5AO76074 875 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 OR4A8P0C604 315 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 EFNA1P20827 205 aaPredicted RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 IDH3GP51553 393 aaPredicted RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 LCP2Q13094 533 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 LASP1Q14847 261 aaKnown RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 SYT14P1Q58G82 188 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 CDC73Q6P1J9 531 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 CASP12Q6UXS9 341 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 USP43Q70EL4 1123 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SNX32Q86XE0 403 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 ZCCHC24Q8N2G6 241 aaKnown RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 SVOPLQ8N434 492 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 TMCO5AQ8N6Q1 288 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 ZNF418Q8TF45 676 aaPredicted RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 STMN2Q93045 179 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 FAM120BQ96EK7 910 aaKnown RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 PPP1R36Q96LQ0 422 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 THTPAQ9BU02 230 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SEC61A2Q9H9S3 476 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 TNFRSF12AQ9NP84 129 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 ESM1Q9NQ30 184 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 DUSP22Q9NRW4 184 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SLC7A10Q9NS82 523 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 NKX1-2Q9UD57 310 aaPredicted RBP8.6□□□□□ -1.03
TPM1-225ENST00000560679 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 LYNX1G3V0Z9 82 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 MRPL33O75394 65 aaKnown RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 SKAP2O75563 359 aaPredicted RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 KRT36O76013 467 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 HMGN2P05204 90 aaKnown RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 LYNX1P0DP58 116 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ASMTP46597 345 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 CCR4P51679 360 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 PKNOX1P55347 436 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 CSNK2A1P68400 391 aaPredicted RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 SKP2Q13309 424 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 PDE7AQ13946 482 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 CBFBQ13951 182 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 KIAA0040Q15053 153 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 HIKESHIQ53FT3 197 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 DCST2Q5T1A1 773 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 TSPO2Q5TGU0 170 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ZCCHC12Q6PEW1 402 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 C16orf89Q6UX73 402 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 CCDC103Q8IW40 242 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ZNF786Q8N393 782 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ZNF614Q8N883 585 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 RP9Q8TA86 221 aaKnown RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 PIGXQ8TBF5 258 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 WDR60Q8WVS4 1066 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 CLPTM1LQ96KA5 538 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ARL5BQ96KC2 179 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ANKRD27Q96NW4 1050 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 STACQ99469 402 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 ZNF747Q9BV97 191 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 PIGUQ9H490 435 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 HIF1ANQ9NWT6 349 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 SLC7A8Q9UHI5 535 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 PCDHB10Q9UN67 800 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 WBP11Q9Y2W2 641 aaKnown RBP8.59□□□□□ -1.03
TPM1-225ENST00000560679 CCL27Q9Y4X3 112 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 PTGDR2Q9Y5Y4 395 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 KCNE3Q9Y6H6 103 aa8.59□□□□□ -1.03
TPM1-225ENST00000560679 B4DSR2 109 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 H3BNH8 94 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 TRIM77I1YAP6 450 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 GTPBP1O00178 669 aaKnown RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 GPR171O14626 319 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 AZIN1O14977 448 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ZNF264O43296 627 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 EIF4E2O60573 245 aaKnown RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 TBX19O60806 448 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 BCAS1O75363 584 aaPredicted RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 RSL1D1O76021 490 aaKnown RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 ANP32DO95626 131 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 UBL4AP11441 157 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 SDC1P18827 310 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ATP6V1C1P21283 382 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 EPHA1P21709 976 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 PCMT1P22061 227 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 MPGP29372 298 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 CALCRP30988 508 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ATP4BP51164 291 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ATP12AP54707 1039 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 SESN3P58005 492 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ACTR3P61158 418 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 MERTKQ12866 999 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 CYLC2Q14093 348 aaPredicted RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 RCN1Q15293 331 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 MAPRE2Q15555 327 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 IMPG1Q17R60 797 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 MIDNQ504T8 468 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms