RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR4M2Q8NGB6 313 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 OR1K1Q8NGR3 316 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 MAGEE2Q8TD90 523 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 OR5P2Q8WZ92 322 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 BCL2L2Q92843 193 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 MOAP1Q96BY2 351 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 DDIT4LQ96D03 193 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CCDC126Q96EE4 140 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 L3HYPDHQ96EM0 354 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 DNAJA3Q96EY1 480 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 KCNA7Q96RP8 456 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 NAPGQ99747 312 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 GPA33Q99795 319 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SLC6A7Q99884 636 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CCDC106Q9BWC9 280 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SF3B5Q9BWJ5 86 aaKnown RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 SLITRK2Q9H156 845 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 NARFLQ9H6Q4 476 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ACSS3Q9H6R3 686 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CTPS2Q9NRF8 586 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 C1orf109Q9NX04 203 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 TMEM216Q9P0N5 145 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 PCDHGB4Q9UN71 923 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 PPIAL4AQ9Y536 164 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ANK2Q01484 3957 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 A0A096LPE4 126 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 A0A1W2PPZ6 126 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 POC1B-GALNT4F8VUJ3 575 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 M0R233 179 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 NR5A2O00482 541 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZNF208O43345 1280 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PLPP2O43688 288 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SYNGR3O43761 229 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PRSS23O95084 383 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 VAMP5O95183 116 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 MPZL1O95297 269 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 LGI1O95970 557 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 IGKV3-15P01624 115 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 IGLV1-44P01699 117 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 HPXP02790 462 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 GSNP06396 782 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 UROSP10746 265 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 EFNA1P20827 205 aaPredicted RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 MATN1P21941 496 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 NR4A1P22736 598 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 GATA3P23771 443 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PRPH2P23942 346 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PRTN3P24158 256 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZFP36P26651 326 aaKnown RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 RYKP34925 604 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ARR3P36575 388 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PGM1P36871 562 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 HPCAL1P37235 193 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 RPL3P39023 403 aaKnown RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 FOXA1P55317 472 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SH3BGRP55822 239 aaPredicted RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 GNG11P61952 73 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 LMO4P61968 165 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TUBA1BP68363 451 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TUBA4AP68366 448 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SKP2Q13309 424 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PDE7AQ13946 482 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ARHGAP11BQ3KRB8 267 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 MMEL1Q495T6 779 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 CFAP157Q5JU67 520 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ELFN2Q5R3F8 820 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OTUD3Q5T2D3 398 aaPredicted RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 DCAF12L2Q5VW00 463 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TUBA1AQ71U36 451 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 CARM1Q86X55 608 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 CCDC36Q8IYA8 594 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 CDK20Q8IZL9 346 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZIC4Q8N9L1 334 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SYT14Q8NB59 555 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 SPATA4Q8NEY3 305 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OR9K2Q8NGE7 335 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OIT3Q8WWZ8 545 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 RAB39BQ96DA2 213 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TSSK3Q96PN8 268 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OR7D2Q96RA2 312 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PAFAH2Q99487 392 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PRPF18Q99633 342 aaKnown RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 CCT7Q99832 543 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 PAIP2Q9BPZ3 127 aaKnown RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZNF416Q9BWM5 594 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TMPRSS13Q9BYE2 586 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 OR11A1Q9GZK7 315 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TSPYL1Q9H0U9 437 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 TPK1Q9H3S4 243 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 GSTO2Q9H4Y5 243 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 C7orf69Q9H7B7 122 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZNF665Q9H7R5 613 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZMAT3Q9HA38 289 aaKnown RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 ESM1Q9NQ30 184 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 G6PC2Q9NQR9 355 aa4.46□□□□□ -1.7
SPG11-208ENST00000558155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 ZNF275Q9NSD4 429 aaPredicted RBP4.46□□□□□ -1.7
SPG11-208ENST00000558155 SIRT3Q9NTG7 399 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms