RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 LIPCP11150 499 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 HIST1H1CP16403 213 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 JUNBP17275 347 aaPredicted RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 CD82P27701 267 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 MSX1P28360 303 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 SLC6A6P31641 620 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 GRK5P34947 590 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 ZNF41P51814 821 aaPredicted RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 SUMO3P55854 103 aaPredicted RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 SNTA1Q13424 505 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 CRMP1Q14194 572 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 SLC25A30Q5SVS4 291 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 PLCZ1Q86YW0 608 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 RASD2Q96D21 266 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 KATNB1Q9BVA0 655 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 CLEC2DQ9UHP7 191 aa12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-212ENST00000556639 NCKAP5O14513 1909 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 DLL1O00548 723 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 GFRA3O60609 400 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SERPINI2O75830 405 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 PTHP01270 115 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SHC1P29353 583 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CD96P40200 585 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 KDM8Q8N371 416 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 OR52E2Q8NGJ4 325 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 LIPHQ8WWY8 451 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 MYDGFQ969H8 173 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 MUL1Q969V5 352 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SIGLEC12Q96PQ1 595 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 HES7Q9BYE0 225 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 FN3KQ9H479 309 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 HIF3AQ9Y2N7 669 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 PRODHO43272 600 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 UQCRC1P31930 480 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CYB561P49447 251 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 ITGADQ13349 1161 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 GPR107Q5VW38 600 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 TMEM81Q6P7N7 255 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CLVS1Q8IUQ0 354 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 PSD4Q8NDX1 1056 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 LGALS12Q96DT0 336 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 RNFT2Q96EX2 444 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 Q96M85 177 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 TAS2R5Q9NYW4 299 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 PCDHGB1Q9Y5G3 927 aa12.48□□□□□ -0.41
EFCAB11-212ENST00000556639 SNPHO15079 494 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 RFPL3SP0C7P2 107 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 IMPDH2P12268 514 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 GRPRP30550 384 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 APOBEC1P41238 236 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 CDH11P55287 796 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 GLYR1Q49A26 553 aaPredicted RBP12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 ALG10Q5BKT4 473 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 MEDAGQ5VYS4 303 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 NANOGNBQ7Z5D8 188 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 SLC37A3Q8NCC5 494 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR4F15Q8NGB8 312 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR52I1Q8NGK6 324 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR9Q1Q8NGQ5 310 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR13F1Q8NGS4 319 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 ZNRF4Q8WWF5 429 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 OR51V1Q9H2C8 321 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 NRIP3Q9NQ35 241 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 LRFN1Q9P244 771 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
EFCAB11-212ENST00000556639 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 EFCAB10A6NFE3 127 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 FTCDNL1E5RQL4 147 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 ETV2O00321 342 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 NEURL1O76050 574 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 SEC14L2O76054 403 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 DXOO77932 396 aaKnown RBP12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 WDPCPO95876 746 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 PLGP00747 810 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 IGF2P01344 180 aa12.46□□□□□ -0.41
EFCAB11-212ENST00000556639 TFPIP10646 304 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms