RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DACH2Q96NX9 599 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 TREX2Q9BQ50 279 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-213ENST00000555386 CDCA4Q9BXL8 241 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 UCK2Q9BZX2 261 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 RACGAP1Q9H0H5 632 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-213ENST00000555386 NMNAT1Q9HAN9 279 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-213ENST00000555386 SDHAF3Q9NRP4 125 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 CLN6Q9NWW5 311 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 AASSQ9UDR5 926 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 DKKL1Q9UK85 242 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 SLC9A8Q9Y2E8 581 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 CARD8Q9Y2G2 431 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 SLC6A5Q9Y345 797 aa8.95□□□□□ -0.98
PSEN1-213ENST00000555386 POLEQ07864 2286 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 COL12A1Q99715 3063 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 A0A0G2JPF8 293 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 A0A1B0GTH9 108 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 A0A1W2PRQ8 180 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 HNRNPCL2B2RXH8 293 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 B4DXG7 233 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 HNRNPCL3B7ZW38 293 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 SHISA8B8ZZ34 492 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 FFAR1O14842 300 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 OIP5O43482 229 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 SOX30O94993 753 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 GASTP01350 101 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 HNRNPCL4P0DMR1 293 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 PLA2G2AP14555 144 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 CHMP24386 653 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ELAVL4P26378 380 aaKnown RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 UGT2B15P54855 530 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 COX10Q12887 443 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 TMED1Q13445 227 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 DGCR6Q14129 220 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 GANABQ14697 944 aaKnown RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 TIGD6Q17RP2 521 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 EIPR1Q53HC9 387 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 WIPI1Q5MNZ9 446 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 TMEM201Q5SNT2 666 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF324BQ6AW86 544 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 Q6ZPB1 254 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF367Q7RTV3 350 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ADCK1Q86TW2 530 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ATCAYQ86WG3 371 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 SIAH3Q8IW03 269 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF619Q8N2I2 560 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 STX19Q8N4C7 294 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 MINDY2Q8NBR6 621 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 OR5M9Q8NGP3 310 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 OR14L1PQ8NHC6 308 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 CHPT1Q8WUD6 406 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 LGALS12Q96DT0 336 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 COX4I2Q96KJ9 171 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 GPR137Q96N19 417 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 TRNT1Q96Q11 434 aaKnown RBP8.94□□□□□ -0.98
PSEN1-213ENST00000555386 SLX1AQ9BQ83 275 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 RHNO1Q9BSD3 238 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 FUZQ9BT04 418 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF350Q9GZX5 532 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 HOXD1Q9GZZ0 328 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 SLC38A1Q9H2H9 487 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 AKIP1Q9NQ31 210 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ALKBH4Q9NXW9 302 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 KCNE5Q9UJ90 142 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 OSGIN1Q9UJX0 560 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 LIPT1Q9Y234 373 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 OSGIN2Q9Y236 505 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 VDAC3Q9Y277 283 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 ERGIC3Q9Y282 383 aa8.94□□□□□ -0.98
PSEN1-213ENST00000555386 TRGV5A0A0B4J1U4 118 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 TRBV4-1A0A0J9YWV2 114 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 EFCAB9A8MZ26 197 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 ALG1L2C9J202 215 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 NPIPA2E9PIF3 369 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 NPIPA3F8WFD2 350 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 SYT5O00445 386 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 KIAA0513O60268 411 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 UGT2B17O75795 530 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 SULT1C4O75897 302 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 LCKP06239 509 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 EDN3P14138 238 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 ABOP16442 354 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 DPP4P27487 766 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 OPRL1P41146 370 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 TDGF1P3P51864 188 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 C17orf67Q0P5P2 114 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 RGS21Q2M5E4 152 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 KLHL26Q53HC5 615 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 MEDAGQ5VYS4 303 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 SLX4IPQ5VYV7 408 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 RNLSQ5VYX0 342 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 C3P1Q6ZMU1 363 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 USP43Q70EL4 1123 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 SLC46A3Q7Z3Q1 461 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 LSRQ86X29 649 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-213ENST00000555386 VRK2Q86Y07 508 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 GHDCQ8N2G8 530 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 FAM83FQ8NEG4 500 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms