RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 SNTNA6NMZ2 147 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 A8MXQ7 604 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 NBR2O15453 112 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 FCMRO60667 390 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 B4GALT2O60909 372 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 PALMO75781 387 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 MMP23AO75900 390 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 TSPAN12O95859 305 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 TIMP1P01033 207 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 IGHDP01880 384 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 RBMY1CP0DJD4 496 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCR1P32246 355 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 EPS15P42566 896 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 QARSP47897 775 aaKnown RBP3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 HMGN5P82970 282 aaKnown RBP3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 ORC2Q13416 577 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 GRB7Q14451 532 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAJINQ3KP22 176 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 C1orf146Q5VVC0 180 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 HSDL2Q6YN16 418 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR52I1Q8NGK6 324 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR13C2Q8NGS9 318 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 SCFD1Q8WVM8 642 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 CXorf40BQ96DE9 158 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 PHYHIPLQ96FC7 376 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 PAGE5Q96GU1 130 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 TECTBQ96PL2 329 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 RNF2Q99496 336 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 ARHGDIGQ99819 225 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 GCOM2Q9BZD3 368 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 BFARQ9NZS9 450 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 V9GY05 133 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 SCAPERQ9BY12 1400 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 FANCAO15360 1455 aa3.84□□□□□ -1.8
CKS1BP1-201ENST00000555221 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 IGHV1OR21-1A0A087WYE8 117 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 TIMM8AO60220 97 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 LGI1O95970 557 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 NCK1P16333 377 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 IL12AP29459 219 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 SHMT2P34897 504 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 ATP1B3P54709 279 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 TIMM10P62072 90 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 RPL23AP62750 156 aaKnown RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 CSNK1G2P78368 415 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 NDPQ00604 133 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF79Q15937 498 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 IMMTQ16891 758 aaKnown RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 DMRTC1Q5HYR2 192 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 GPRC6AQ5T6X5 926 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR52E8Q6IFG1 317 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 TGIF2LXQ8IUE1 241 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 C10orf35Q96D05 121 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 TIMD4Q96H15 378 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 MTMR9Q96QG7 549 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 POLR2J2Q9GZM3 115 aaKnown RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 POLR2J3Q9H1A7 115 aaKnown RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 NARFLQ9H6Q4 476 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 SUDS3Q9H7L9 328 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 ADAM22Q9P0K1 906 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 IL17CQ9P0M4 197 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 NAP1L2Q9ULW6 460 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 MIA2Q96PC5 1412 aa3.83□□□□□ -1.8
CKS1BP1-201ENST00000555221 TP53BP1Q12888 1972 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZCCHC11Q5TAX3 1644 aaKnown RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 DIP2BQ9P265 1576 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF518AQ6AHZ1 1483 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 TCRBV9S1A1TA0A576 114 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 STAMBPO95630 424 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 RDXP35241 583 aaKnown RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 NOVP48745 357 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 CDH4P55283 916 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 OGDHQ02218 1023 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 VGLL4Q14135 290 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 OXA1LQ15070 435 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 MICBQ29980 383 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 PARP15Q460N3 678 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 PGAP1Q75T13 922 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 RUFY3Q7L099 469 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 TGIF2LYQ8IUE0 185 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ERI1Q8IV48 349 aaKnown RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR4K14Q8NGD5 310 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 MAGEE2Q8TD90 523 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 BRSK1Q8TDC3 778 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 NPY6RQ99463 290 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 GON7Q9BXV9 100 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR51J1Q9H342 316 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 PLGRKTQ9HBL7 147 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 HYPKQ9NX55 129 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 SEC14L3Q9UDX4 400 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 STAP1Q9ULZ2 295 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 HPCAL4Q9UM19 191 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms