RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 MYO1GB0I1T2 1018 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 LYNX1G3V0Z9 82 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PDLIM1O00151 329 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 UBFD1O14562 309 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ADAMDEC1O15204 470 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ACOX3O15254 700 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SPRY1O43609 319 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 OR4F21O95013 312 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SEMA3DO95025 777 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PGM3O95394 542 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 H6PDO95479 791 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 OXSR1O95747 527 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ANGPTL1O95841 491 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 IGHV3-9P01782 118 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MBPP02686 304 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RPS17P08708 135 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 LINGO3P0C6S8 592 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 LYNX1P0DP58 116 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ACP2P11117 423 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 STMN1P16949 149 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF17P17021 662 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 EFNA1P20827 205 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF10P21506 573 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 GCAP28676 217 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SLC7A1P30825 629 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TTKP33981 857 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ANP32AP39687 249 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 GP5P40197 560 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MAGEA12P43365 314 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PRIM2P49643 509 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RAP1GDS1P52306 607 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PNLIPRP2P54317 469 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CASP9P55211 416 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RAB10P61026 200 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ATP6V0D1P61421 351 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 FOXF1Q12946 379 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CSTF3Q12996 717 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 BIKQ13323 160 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RCN2Q14257 317 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MORF4L2Q15014 288 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TRIP10Q15642 601 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF239Q16600 458 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZSWIM7Q19AV6 140 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PLPPR5Q32ZL2 321 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ATP6AP1LQ52LC2 224 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 UNC50Q53HI1 259 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PAGE2BQ5JRK9 111 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SH2D4BQ5SQS7 431 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CCNYL2Q5T2Q4 361 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CCNJQ5T5M9 372 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ANKRD26P1Q6NSI1 321 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CYP20A1Q6UW02 462 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 Q6ZSR9 355 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 NUDT13Q86X67 352 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MEX3DQ86XN8 651 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC8AQ8IWT6 810 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZBED8Q8IZ13 594 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZCCHC24Q8N2G6 241 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TXLNBQ8N3L3 684 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TCAIMQ8N3R3 496 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C1orf52Q8N6N3 182 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CEP112Q8N8E3 955 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PTGR2Q8N8N7 351 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SRFBP1Q8NEF9 429 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 OR4K17Q8NGC6 315 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 FAM110BQ8TC76 370 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 FBXO25Q8TCJ0 367 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RNF128Q8TEB7 428 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C16orf78Q8WTQ4 265 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MAIP1Q8WWC4 291 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 OSTF1Q92882 214 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 EXOSC8Q96B26 276 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 KLHL29Q96CT2 875 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PHF21BQ96EK2 531 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C16orf58Q96GQ5 468 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 GMPPAQ96IJ6 420 aaPredicted RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 RNF145Q96MT1 663 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 FOXN4Q96NZ1 517 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 KCNA7Q96RP8 456 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PSD2Q9BQI7 771 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PELOQ9BRX2 385 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC1Q9BTT6 524 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C1QTNF6Q9BXI9 259 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C1QTNF5Q9BXJ0 243 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CAPS2Q9BXY5 557 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 EBPLQ9BY08 206 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ACPTQ9BZG2 426 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MYLK2Q9H1R3 596 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 DPH5Q9H2P9 285 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CXorf56Q9H5V9 222 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CHODLQ9H9P2 273 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ESM1Q9NQ30 184 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 MED17Q9NVC6 651 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CISD1Q9NZ45 108 aaKnown RBP2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ZIM2Q9NZV7 527 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 UTS2RQ9UKP6 389 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SNX12Q9UMY4 172 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PPP2R2CQ9Y2T4 447 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 GPR52Q9Y2T5 361 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ACOT9Q9Y305 439 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms