RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CHMLP26374 656 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 PTGDSP41222 190 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 ARFIP1P53367 373 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 POLR2FP61218 127 aaKnown RBP1.87□□□□□ -2.11
VRK1-202ENST00000553683 SELENOTP62341 195 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 CCNA1P78396 465 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 BEX3Q00994 111 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 SNTB2Q13425 540 aaKnown RBP1.87□□□□□ -2.11
VRK1-202ENST00000553683 PTCH1Q13635 1447 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 GGTLC2Q14390 218 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 INAQ16352 499 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 MAPK6Q16659 721 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 ANKDD1AQ495B1 522 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 FAM71F2Q6NXP2 309 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 KDELC1Q6UW63 502 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 ZFP2Q6ZN57 461 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 CLDN19Q8N6F1 224 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 KIR3DL3Q8N743 410 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 OR6C4Q8NGE1 309 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 ERMNQ8TAM6 284 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 DEDD2Q8WXF8 326 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.87□□□□□ -2.11
VRK1-202ENST00000553683 CTRCQ99895 268 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 NIPSNAP3BQ9BS92 247 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 SPATA16Q9BXB7 569 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 GSDMCQ9BYG8 508 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 C1orf21Q9H246 121 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 NCOR1P1Q9H4R4 102 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 TMEM165Q9HC07 324 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 BICRAQ9NZM4 1560 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 HOOK1Q9UJC3 728 aaKnown RBP1.87□□□□□ -2.11
VRK1-202ENST00000553683 ALG6Q9Y672 507 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 V9GY05 133 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 LRP4O75096 1905 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 TOP2BQ02880 1626 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 GAKO14976 1311 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 UNC79Q9P2D8 2635 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 KDRP35968 1356 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.86□□□□□ -2.11
VRK1-202ENST00000553683 SETD1AO15047 1707 aaKnown RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 ARPC4-TTLL3A0A0A6YYG9 625 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 A0A0G2JN53 185 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 H0YC42 278 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 AP3B1O00203 1094 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 CLDN3O15551 220 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 FOXH1O75593 365 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 MFN2O95140 757 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 P04436 131 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 LGALS2P05162 132 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ANXA13P27216 316 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ADSSP30520 456 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 FGF9P31371 208 aaPredicted RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 CA8P35219 290 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ATP6V1E1P36543 226 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 GLP1RP43220 463 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 DAP3P51398 398 aaKnown RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 CCNHP51946 323 aaPredicted RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 NUCB2P80303 420 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 IL1RL1Q01638 556 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 CNTN2Q02246 1040 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 SCGB2A2Q13296 93 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 PPP1R7Q15435 360 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 CEBPEQ15744 281 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 TATDN3Q17R31 274 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 MAJINQ3KP22 176 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 PIGGQ5H8A4 983 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 TMIGD1Q6UXZ0 262 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 PRSS41Q7RTY9 318 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 DPY19L4Q7Z388 723 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 KRT222Q8N1A0 295 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 OR10G9Q8NGN4 311 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ZNF596Q8TC21 504 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ACMSDQ8TDX5 336 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 HTR3CQ8WXA8 447 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 ST8SIA1Q92185 356 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 SHC3Q92529 594 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 SLC35B4Q969S0 331 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 EXOSC8Q96B26 276 aaKnown RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 NRBF2Q96F24 287 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 SEC22AQ96IW7 307 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 C7orf34Q96L11 122 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 C12orf66Q96MD2 445 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 TSNARE1Q96NA8 513 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 P2RY13Q9BPV8 354 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 RTBDNQ9BSG5 229 aaPredicted RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 CRACR2AQ9BSW2 395 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 OSBPL10Q9BXB5 764 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 C20orf85Q9H1P6 137 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 RHBGQ9H310 441 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 VCX3BQ9H321 246 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 TPK1Q9H3S4 243 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 VPS37BQ9H9H4 285 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 FOLH1BQ9HBA9 442 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 CRLF2Q9HC73 371 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 DDX18Q9NVP1 670 aaKnown RBP1.86□□□□□ -2.11
VRK1-202ENST00000553683 AATFQ9NY61 560 aaKnown RBP eCLIP1.86□□□□□ -2.11
VRK1-202ENST00000553683 UBAP1Q9NZ09 502 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 EXTL2Q9UBQ6 330 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 SH3BGRL2Q9UJC5 107 aa1.86□□□□□ -2.11
VRK1-202ENST00000553683 KIF3AQ9Y496 699 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms