RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	CDH11	P55287	796 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	RAB40B	Q12829	278 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	SYT6	Q5T7P8	510 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	RNLS	Q5VYX0	342 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	CPO	Q8IVL8	374 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	BEST3	Q8N1M1	668 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	LRRC75A	Q8NAA5	344 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	MOSPD2	Q8NHP6	518 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	POC1B	Q8TC44	478 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZBTB8A	Q96BR9	441 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	DDIT4L	Q96D03	193 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	CRELD1	Q96HD1	420 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	PROK2	Q9HC23	129 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	NRIP3	Q9NQ35	241 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	SACM1L	Q9NTJ5	587 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ABI3	Q9P2A4	366 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	TEKT2	Q9UIF3	430 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	FBXL2	Q9UKC9	423 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	IER3IP1	Q9Y5U9	82 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	SPIN1	Q9Y657	262 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	FRYL	O94915	3013 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	PRR23D1	E9PI22	279 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	BLOC1S5-TXNDC5	H3BN57	136 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	IMPA2	O14732	288 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	INMT	O95050	263 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	RAB36	O95755	333 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	APEH	P13798	732 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	PAICS	P22234	425 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ITGA3	P26006	1051 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	DCK	P27707	260 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ADH6	P28332	368 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	EIF1	P41567	113 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	MTNR1A	P48039	350 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	RPL18	Q07020	188 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ITGAD	Q13349	1161 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	TMED1	Q13445	227 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	MFSD13A	Q14CX5	517 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	RTP5	Q14D33	572 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	TGIF1	Q15583	401 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	INPP5J	Q15735	1006 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	CNPY1	Q3B7I2	92 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	GXYLT1	Q4G148	440 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ALG10	Q5BKT4	473 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ARMC4	Q5T2S8	1044 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ABHD17B	Q5VST6	288 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	C1QL3	Q5VWW1	255 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	NIPAL3	Q6P499	406 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	PLBD1	Q6P4A8	553 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	IGFN1	Q86VF2	1251 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	CLEC1A	Q8NC01	280 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	BBS1	Q8NFJ9	593 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR52I1	Q8NGK6	324 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR1J4	Q8NGS1	313 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR5J2	Q8NH18	312 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	LGALS12	Q96DT0	336 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	RNFT2	Q96EX2	444 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	NPAS1	Q99742	590 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	POTEKP	Q9BYX7	375 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR11A1	Q9GZK7	315 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	FGF20	Q9NP95	211 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	SERINC1	Q9NRX5	453 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	RSL24D1	Q9UHA3	163 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	CDV3	Q9UKY7	258 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	DIMT1	Q9UNQ2	313 aa	Known RBP	11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	COMMD3-BMI1	R4GMX3	469 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	CPAMD8	Q8IZJ3	1885 aa		11.48	□□□□□ -0.57
CACNB3-223	ENST00000552480	FTCDNL1	E5RQL4	147 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF701	M0R085	212 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	TRIM3	O75382	744 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	TXNDC12	O95881	172 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CD14	P08571	375 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ADRA2A	P08913	450 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ADORA3	P0DMS8	318 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	HIST1H1C	P16403	213 aa	Known RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ACVR2A	P27037	513 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	PSMB9	P28065	219 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	GRPR	P30550	384 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CASR	P41180	1078 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CYB561	P49447	251 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	DSCR4	P56555	118 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CAMK2B	Q13554	666 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CRMP1	Q14194	572 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	SGCB	Q16585	318 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	C3orf33	Q6P1S2	294 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	MEPCE	Q7L2J0	689 aa	Known RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF367	Q7RTV3	350 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	MDGA2	Q7Z553	956 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAM98A	Q8NCA5	519 aa	Known RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC37A3	Q8NCC5	494 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	PSD4	Q8NDX1	1056 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	MFSD8	Q8NHS3	518 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC25A36	Q96CQ1	311 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms