RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
CHMP1A-210ENST00000551981 ARPC4-TTLL3A0A0A6YYG9 625 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 A0A0A6YYJ9 748 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 AQP7P3A6NL99 342 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 CLDN24A6NM45 220 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 SLCO1B7G3V0H7 640 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 hCG_2039718K7EN88 272 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 FAAHO00519 579 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 AP3D1O14617 1153 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 SPRY1O43609 319 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 AKR7A3O95154 331 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 IL2RGP31785 369 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 CDH15P55291 814 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 FUT5Q11128 374 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 CEACAM7Q14002 265 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 OR7A5Q15622 319 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ANXA8L1Q5VT79 327 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 TMEM225Q6GV28 225 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 TMEM99Q8N816 258 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ZIC4Q8N9L1 334 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 OR8J2Q8NGG1 315 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ZFAND2BQ8WV99 257 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ZG16BQ96DA0 208 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ANKRD27Q96NW4 1050 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 MECRQ9BV79 373 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 TAPBPLQ9BX59 468 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 OCEL1Q9H607 264 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 MKS1Q9NXB0 559 aa12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 CRNNQ9UBG3 495 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-210ENST00000551981 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ZC3H12DA2A288 527 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 LIPT2A6NK58 231 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 WIPF1O43516 503 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 SCN2BO60939 215 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 LILRA1O75019 489 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 VAMP5O95183 116 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 CPSF4O95639 269 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 CECR9P0C854 216 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 IFNGR1P15260 489 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 NPR2P20594 1047 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 CXCR1P25024 350 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 PLAURQ03405 335 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 GSTA3Q16772 222 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 SMU1Q2TAY7 513 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 SAXO2Q658L1 398 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ZCCHC23Q6ZST2 131 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ZNF786Q8N393 782 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 MAGEE2Q8TD90 523 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 WDR60Q8WVS4 1066 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 BCL2L2Q92843 193 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ZMYND19Q96E35 227 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 NEURL3Q96EH8 262 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ALKBH3Q96Q83 286 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 ZDHHC2Q9UIJ5 367 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 DYSFO75923 2080 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 MGAM2Q2M2H8 2515 aa12.31□□□□□ -0.44
CHMP1A-210ENST00000551981 AGAP5A6NIR3 686 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 IL7RP16871 459 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 CALCRP30988 508 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 ANXA11P50995 505 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 TUBA1BP68363 451 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 TUBA4AP68366 448 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 TUBA1AQ71U36 451 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 GLCCI1Q86VQ1 547 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 GSPT2Q8IYD1 628 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 ZNF440Q8IYI8 595 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 SVOPLQ8N434 492 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 UBASH3BQ8TF42 649 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 ZIM3Q96PE6 472 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 TRNT1Q96Q11 434 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 DPY30Q9C005 99 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 PRDM4Q9UKN5 801 aa12.3□□□□□ -0.44
CHMP1A-210ENST00000551981 A0A096LPE4 126 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 A0A1W2PPZ6 126 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 B4DSR2 109 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 HMGN4O00479 90 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 NR5A2O00482 541 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 IGKV3-15P01624 115 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 DBIP07108 87 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 NUDT17P0C025 328 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms